This repository contains teaching materials, demonstrations, and slide decks for teaching a mini Metagenomic Binning Workshop Module at the University of Wisconsin - Madison.
This lesson uses data from Scarborough 2018: Scarborough MJ, Lawson CE, Hamilton JJ, Donohue TJ, Noguera DR. 2018. Metatranscriptomic and thermodynamic insights into medium-chain fatty acid production using an anaerobic microbiome. mSystems 3:e00221-18.https://doi.org/10.1128/mSystems.00221-18.
- data: raw and polished data used throughout the module
- instructions: teaching instructions and outlines
- lessons: lesson demonstrations for module website
- scripts: analysis scripts
- slide_decks: teaching slides for concept intros