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1. metabolisHMM metabolisHMM Public

   Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs

   Python 18 5

2. BLAST-DAGMan BLAST-DAGMan Public

   Directed Acyclic Workflow Manager for running BLAST all-v-all on HTCondor

   Python

3. MEHG MEHG Public

   Exploring the phylogenetic and metabolic diversity of microbial mercury methylation

   R 3

4. EBPR-MAGs EBPR-MAGs Public

   Extracting, refining, and utilizing MAGs from EBPR reactor metagenomic time-series

   HTML 1 2

5. genomes-MAGs-database genomes-MAGs-database Public

   Creation of a database of Genbank genomes including isolate reference genomes and MAGs, and parallelizing 1000s of genome searches for a specific marker

   Python 8 2

6. ppk1_Database ppk1_Database Public

   Repository for assigning Accumulibacter clade designations based on ppk1 nomenclature

   1