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Sysmem should throw an error if we try to connect monomer to already occopied attachment point #2078

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AlexeyGirin opened this issue Jul 3, 2024 · 3 comments · Fixed by #2284
Closed

Sysmem should throw an error if we try to connect monomer to already occopied attachment point #2078

AlexeyGirin opened this issue Jul 3, 2024 · 3 comments · Fixed by #2284
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@AliaksandrDziarkach
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Bug HELM Bucket: Bugs related to Export to HELM format Priority: Medium
Milestone
Indigo-1.24.0-rc.1

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@AlexeyGirin
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Steps to Reproduce

  1. Go to Macromolecules mode - Flex mode
  2. Load using paste from clipboard IDT type: CHEM1{[MCC]}|RNA1{R(U)P}$CHEM1,RNA1,1:R1-1:R2$$$V2.0
    image

Actual behavior
System load something
image

Expected behavior
Error should occur - Can't connect to R2 attachment point of monomer index 1 of RNA1 - it is already occupied

Versions

  • Ketcher Version 2.23.0-rc.1 Build at 2024-07-02; 08:57:41
  • Indigo Toolkit Version 1.22.0-rc.1.0-g2bef0ce6c-wasm32-wasm-clang-19.0.0
  • Windows 10 Pro
  • Chrome Version 126.0.6478.127 (Official Build) (64-bit)

Issue found while testing - #1188
@AlexeyGirin AlexeyGirin added Bug Priority: Medium HELM Bucket: Bugs related to Export to HELM format labels Jul 3, 2024
@AliaksandrDziarkach
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Planed to fix with variant monomers helm support.

@AlexeyGirin
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Re-CHECK

@AliaksandrDziarkach AliaksandrDziarkach linked a pull request Aug 30, 2024 that will close this issue
#2120 Export the structure for nucleotides 2-Amino-dA does not work correctly #2284
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@split-ends
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Successfully verified: an error appears with the corresponding message:
image

Environment details:
Ketcher Version: 2.25.0-rc.1 Build at 2024-09-03; 15:31:03
Indigo Version: 1.24.0-rc.1.0-gb8f099851-wasm32-wasm-clang-19.0.0
Chrome Version: Version 128.0.6613.113 (Official Build) (64-bit)
Windows 11 Enterprise

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@AliaksandrDziarkach AliaksandrDziarkach

Labels
Bug HELM Bucket: Bugs related to Export to HELM format Priority: Medium
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Milestone
Indigo-1.24.0-rc.1
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Successfully merging a pull request may close this issue.

#2120 Export the structure for nucleotides 2-Amino-dA does not work correctly epam/Indigo
4 participants
@even1024 @AliaksandrDziarkach @AlexeyGirin @split-ends