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EpiMath

Eisenberg Research Group

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  1. param-estimation-SIR param-estimation-SIR Public

    Forked from marisae/param-estimation-SIR

    Example R, Python, and Matlab code for ML estimation with an SIR model, as well as for examining identifiability and uncertainty using the Fisher information matrix and profile likelihoods.

    R 32 13

  2. epid-814-materials epid-814-materials Public

    Class Materials for Epid 814

    HTML 5 3

  3. gravity-model-ebola gravity-model-ebola Public

    Code for the Ebola spatial modeling project.

    MATLAB 3 1

  4. cholera-distinguishability cholera-distinguishability Public

    Code for cholera model comparison and distinguishability project.

    MATLAB 2

  5. dengue_model dengue_model Public

    dengue transmission model project

    Python 2 1

  6. Hepatitis-C-in-Young-PWID Hepatitis-C-in-Young-PWID Public

    Code for: Gicquelais RE, Foxman B, Coyle J, Eisenberg MC. (2019). Hepatitis C transmission in young people who inject drugs: insights using a dynamic model informed by state public health surveilla…

    R 2

Repositories

Showing 10 of 16 repositories
  • mipalettes Public

    R package for color palettes related to MI Umbrella and other pandemic response projects

    epimath/mipalettes’s past year of commit activity
    R 0 1 0 0 Updated Oct 28, 2023
  • norovirus_gii_wastewater_monitoring Public

    for Norovirus GII wastewater monitoring for epidemiological surveillance

    epimath/norovirus_gii_wastewater_monitoring’s past year of commit activity
    HTML 0 1 0 0 Updated Oct 16, 2023
  • comm_wander_plot Public
    epimath/comm_wander_plot’s past year of commit activity
    R 0 1 0 0 Updated May 15, 2023
  • BAIT_software Public

    Biofilm Architecture Inference Tool

    epimath/BAIT_software’s past year of commit activity
    1 MIT 0 0 0 Updated Apr 30, 2023
  • vaxx_maps_anyone Public Forked from julesjulesjules/vaxx_maps_anyone
    epimath/vaxx_maps_anyone’s past year of commit activity
    R 0 2 0 0 Updated Oct 25, 2022
  • epid-814-materials Public

    Class Materials for Epid 814

    epimath/epid-814-materials’s past year of commit activity
    HTML 5 3 0 0 Updated Dec 2, 2021
  • age-pde-identifiability Public
    epimath/age-pde-identifiability’s past year of commit activity
    Mathematica 0 MIT 0 0 0 Updated Oct 21, 2021
  • cm-dag Public

    Code for the compartmental model/DAG project.

    epimath/cm-dag’s past year of commit activity
    R 1 MIT 1 0 0 Updated Oct 7, 2019
  • Hepatitis-C-in-Young-PWID Public

    Code for: Gicquelais RE, Foxman B, Coyle J, Eisenberg MC. (2019). Hepatitis C transmission in young people who inject drugs: insights using a dynamic model informed by state public health surveillance. Epidemics. https://doi.org/10.1016/j.epidem.2019.02.003

    epimath/Hepatitis-C-in-Young-PWID’s past year of commit activity
    R 2 MIT 0 0 0 Updated Mar 21, 2019
  • joint-genital-sero-HPV-model Public

    Code for "Integrating measures of viral prevalence and seroprevalence: a mechanistic modeling approach to explaining cohort patterns of HPV in women in the U.S." (Brouwer, Meza, Eisenberg, 2019)

    epimath/joint-genital-sero-HPV-model’s past year of commit activity
    R 1 MIT 0 0 0 Updated Feb 10, 2019
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