Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

🐛 Bug: Ersilia Installation on MacOS Monterey #591

Closed
GemmaTuron opened this issue Feb 2, 2023 · 2 comments
Closed

🐛 Bug: Ersilia Installation on MacOS Monterey #591

GemmaTuron opened this issue Feb 2, 2023 · 2 comments
Labels
bug Something isn't working

Comments

@GemmaTuron
Copy link
Member

Describe the bug.

When attempting to install ersilia on a MacOS Monterey 12, we consistently got a segmentation fault 11 error, even though everything seemed to go smoothly with python3 -m pip install -e .
We finally identified the source of the error by running the following script:

import faulthandler
faulthandler.enable()
import ersilia

The output pointed a protobuf error (log attached)
Solved via conda install -c conda-forge protobuf
log_faulthandler.txt

Describe the steps to reproduce the behavior

No response

Expected behavior.

No response

Screenshots.

No response

Operating environment

Monterey 12

Additional context

No response

@GemmaTuron GemmaTuron added the bug Something isn't working label Feb 2, 2023
@GemmaTuron
Copy link
Member Author

should we specify that in the installation requirements?

Also pygithub was not installed and had to install manually?

@GemmaTuron
Copy link
Member Author

This issue has been continued in #610
I will close that one to keep the discussion in one place

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

1 participant