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Generate a ideogram plot (with karyoploteR) using a feature type or attribute key selected by the user.
Obs: It would require a .fai (samtools faidx) or genome file as input to get the chr sizes.
samtools faidx
The text was updated successfully, but these errors were encountered:
Already being tackled in https://github.com/fmalmeida/gff-toolbox/tree/develop develop branch.
It is already producing the plot. Just needs to update the documentation, the conda recipe and requirements, and make better defaults for the plot.
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This module seems almost ready. Already implements with compressed or uncompressed files. But, for now it only plots one feature at a time.
Must make this module understand more than one feature, and plot them with different colors
fmalmeida
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Generate a ideogram plot (with karyoploteR) using a feature type or attribute key selected by the user.
The text was updated successfully, but these errors were encountered: