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Thanks @foxel it worked great su -s /bin/sh seafile then seaf-fsck (just had to chown -R seafile:seafile my external drive before switching to seafile user).
docker compose exec -it seafile bash
cd /opt/seafile/6.3.3/
./seaf-fsck.sh --export some-library-id /seafile/export/
seaf-fsck.c(156): Current user (0) is not the user for running seafile server (999). Unable to run fsck.
Trying to use seafile user (999) does not seem possible :
su - seafile
logs back to root.seafile image 6.3.3
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