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NAMESPACE
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NAMESPACE
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importFrom("utils", "str", "capture.output", "packageVersion")
importFrom("stats", "aggregate", "na.pass")
importFrom("utils", "head", "read.table", "tar", "untar",
"write.table")
# mfdb_bulk.R
export(mfdb_cs_dump)
export(mfdb_cs_restore)
# mfdb_aggregate_group.R
export(mfdb_group)
export(mfdb_timestep_yearly)
export(mfdb_timestep_biannually)
export(mfdb_timestep_quarterly)
export(mfdb_group_numbered)
export(mfdb_bootstrap_group)
# mfdb_aggregate_interval.R
export(mfdb_interval)
importFrom("utils", "tail")
# mfdb_aggregate_na_group.R
export(mfdb_na_group)
# mfdb_aggregate_step_interval.R
export(mfdb_step_interval)
# mfdb.R
importFrom(DBI, dbConnect, dbDisconnect, dbDriver, dbSendQuery, dbFetch, dbGetQuery, dbCommit, dbRollback, dbGetRowsAffected, dbClearResult, dbWriteTable, dbBegin)
export(mfdb)
export(mfdb_disconnect)
# mfdb_dplyr.R
export(mfdb_dplyr_table)
export(mfdb_dplyr_survey_index)
export(mfdb_dplyr_division)
export(mfdb_dplyr_sample)
export(mfdb_dplyr_predator)
export(mfdb_dplyr_prey)
importFrom("rlang", ":=")
# mfdb_helpers.R
export(mfdb_concatenate_results)
export(mfdb_find_species)
# mfdb_import_data.R
export(mfdb_import_temperature)
export(mfdb_import_survey_index)
export(mfdb_import_survey)
export(mfdb_import_stomach)
# mfdb_import_taxonomy.R
export(mfdb_import_area)
export(mfdb_import_division)
export(mfdb_import_sampling_type)
export(mfdb_import_bait_type_taxonomy)
export(mfdb_import_cs_taxonomy)
export(mfdb_import_gear_taxonomy)
export(mfdb_import_tow_taxonomy)
export(mfdb_import_net_type_taxonomy)
export(mfdb_import_population_taxonomy)
export(mfdb_import_port_taxonomy)
export(mfdb_import_trip_taxonomy)
export(mfdb_import_vessel_taxonomy)
export(mfdb_import_vessel_owner_taxonomy)
export(mfdb_import_species_taxonomy)
export(mfdb_empty_taxonomy)
# mfdb_queries.R
export(mfdb_area_size)
export(mfdb_area_size_depth)
export(mfdb_temperature)
export(mfdb_survey_index_mean)
export(mfdb_survey_index_total)
export(mfdb_sample_count)
export(mfdb_sample_meanlength_stddev)
export(mfdb_sample_meanlength)
export(mfdb_sample_totalweight)
export(mfdb_sample_meanweight)
export(mfdb_sample_meanweight_stddev)
export(mfdb_sample_rawdata)
export(mfdb_sample_scaled)
export(mfdb_stomach_preycount)
export(mfdb_stomach_preymeanlength)
export(mfdb_stomach_preymeanweight)
export(mfdb_stomach_preyweightratio)
export(mfdb_stomach_presenceratio)
# mfdb_sharing.R
export(mfdb_share_with)
# mfdb_aggregate_unaggregated.R
export(mfdb_unaggregated)
# ewe_model.R
export(mfdb_rpath_params)
# gadget_areafile.R
export(gadget_areafile)
S3method(gadget_dir_write, gadget_areafile)
# gadget_directory.R
export(gadget_directory)
export(gadget_dir_write)
export(gadget_dir_read)
S3method(gadget_dir_read, gadget_directory)
# gadget_file.R
export(gadget_file)
S3method(print, gadget_file)
S3method(as.character, gadget_file)
S3method(gadget_dir_write, gadget_file)
export(read.gadget_file)
# gadget_fleetfile.R
export(gadget_fleet_component)
S3method(gadget_dir_write, gadget_fleet_component)
# gadget_likelihood_component.R
export(gadget_likelihood_component)
S3method(gadget_dir_write, gadget_likelihood_component)
# gadeget_stockfile.R
export(gadget_stockfile_extremes)
export(gadget_stockfile_refweight)
export(gadget_stockfile_initialconditions)
export(gadget_stockfile_recruitment)
S3method(gadget_dir_write, gadget_stockfile)