make: *** [icu69/common/uarrsort.o] Error 1

[Dokmen]

Hi all,

I have errors during installation of stringi package. I'm a user in the linux-gnu with gcc 4.8.5 and my R version is 4.0.2. I do not have root privileges. The installation errors are:

`install.packages("stringi")
Installing package into ?/truba/home/XXXX/R/x86_64-pc-linux-gnu-library/4.0?
(as ?lib? is unspecified)
trying URL 'https://cran.rstudio.com/src/contrib/stringi_1.6.1.tar.gz'
Content type 'application/x-gzip' length 7569954 bytes (7.2 MB)
downloaded 7.2 MB

• installing source package ?stringi? ...
  ** package ?stringi? successfully unpacked and MD5 sums checked
  ** using staged installation
  checking for R_HOME... /truba/sw/centos7.3/app/R/4.0.2/lib64/R
  checking for R... /truba/sw/centos7.3/app/R/4.0.2/lib64/R/bin/R
  checking for endianness... little
  checking for R >= 3.1.0 for C++11 use... yes
  checking for R < 3.4.0 for CXX1X flag use... no
  checking for cat... /bin/cat
  checking for local ICUDT_DIR... icu69/data
  checking for gcc... gcc -std=gnu99
  checking whether the C compiler works... yes
  checking for C compiler default output file name... a.out
  checking for suffix of executables...
  checking whether we are cross compiling... no
  checking for suffix of object files... o
  checking whether we are using the GNU C compiler... yes
  checking whether gcc -std=gnu99 accepts -g... yes
  checking for gcc -std=gnu99 option to accept ISO C89... none needed
  checking how to run the C preprocessor... gcc -std=gnu99 -E
  checking for grep that handles long lines and -e... /bin/grep
  checking for egrep... /bin/grep -E
  checking for ANSI C header files... yes
  checking for sys/types.h... yes
  checking for sys/stat.h... yes
  checking for stdlib.h... yes
  checking for string.h... yes
  checking for memory.h... yes
  checking for strings.h... yes
  checking for inttypes.h... yes
  checking for stdint.h... yes
  checking for unistd.h... yes
  checking elf.h usability... yes
  checking elf.h presence... yes
  checking for elf.h... yes
  checking whether we are using the GNU C++ compiler... yes
  checking whether g++ -std=gnu++11 accepts -g... yes
  checking whether the C++ compiler supports the long long type... yes
  checking whether the compiler implements namespaces... yes
  checking whether the compiler supports Standard Template Library... yes
  checking whether std::map is available... yes
  checking for pkg-config... /bin/pkg-config
  checking with pkg-config for the system ICU4C... 50.2
  checking for ICU4C >= 55... no
  *** ICU4C 50.2 has been detected
  *** Minimal requirements, i.e., ICU4C >= 55, are not met
  *** Trying with 'standard' fallback flags
  checking whether an ICU4C-based project can be built... yes
  checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... no
  *** This version of ICU4C cannot be used.
  checking whether we may compile src/icu69/common/putil.cpp... yes
  checking whether we may compile src/icu69/i18n/number_affixutils.cpp... yes
  checking whether the ICU data library can be downloaded... downloading the ICU data library (icudt)
  output path: icu69/data/icu4c-69_1-data-bin-l.zip
  trying URL 'https://raw.githubusercontent.com/gagolews/stringi/master/src/icu69/data/icu4c-69_1-data-bin-l.zip'
  Content type 'application/zip' length 11454999 bytes (10.9 MB)
  ==================================================
  downloaded 10.9 MB

icudt fetch successful
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/uconfig_local.h
config.status: creating src/install.libs.R

*** stringi configure summary:
ICU_FOUND=0
ICUDT_DIR=icu69/data
ICU_BUNDLE_VERSION=69
ICUDT_ENDIANNESS=little
STRINGI_CXXSTD=CXX_STD=CXX11
STRINGI_CFLAGS= -fpic
STRINGI_CPPFLAGS=-I. -Iicu69 -DU_STRINGI_PATCHES -Iicu69/unicode -Iicu69/common -Iicu69/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -DUCONFIG_USE_LOCAL -UDEBUG -DNDEBUG -DU_HAVE_ELF_H
STRINGI_CXXFLAGS= -fpic
STRINGI_LDFLAGS=
STRINGI_LIBS=

*** Compiler settings used:
CC=gcc -std=gnu99
LD=g++ -std=gnu++11
CFLAGS=-g -O2 -fpic
CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG
CXX=g++ -std=gnu++11
CXXFLAGS=-g -O2 -fpic
LDFLAGS=
LIBS=

** libs
g++ -std=gnu++11 -I"/truba/sw/centos7.3/app/R/4.0.2/lib64/R/include" -DNDEBUG -I. -Iicu69 -DU_STRINGI_PATCHES -Iicu69/unicode -Iicu69/common -Iicu69/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -DUCONFIG_USE_LOCAL -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o
g++ -std=gnu++11 -I"/truba/sw/centos7.3/app/R/4.0.2/lib64/R/include" -DNDEBUG -I. -Iicu69 -DU_STRINGI_PATCHES -Iicu69/unicode -Iicu69/common -Iicu69/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -DUCONFIG_USE_LOCAL -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o
g++ -std=gnu++11 -I"/truba/sw/centos7.3/app/R/4.0.2/lib64/R/include" -DNDEBUG -I. -Iicu69 -DU_STRINGI_PATCHES -Iicu69/unicode -Iicu69/common -Iicu69/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -DUCONFIG_USE_LOCAL -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o
g++ -std=gnu++11 -I"/truba/sw/centos7.3/app/R/4.0.2/lib64/R/include" -DNDEBUG -I. -Iicu69 -DU_STRINGI_PATCHES -Iicu69/unicode -Iicu69/common -Iicu69/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -DUCONFIG_USE_LOCAL -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o
g++ -std=gnu++11 -I"/truba/sw/centos7.3/app/R/4.0.2/lib64/R/include" -DNDEBUG -I. -Iicu69 -DU_STRINGI_PATCHES -Iicu69/unicode -Iicu69/common -Iicu69/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -DUCONFIG_USE_LOCAL -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -

---

icu69/common/uarrsort.cpp: In function ?constexpr int32_t sizeInMaxAlignTs(int32_t)?:
icu69/common/uarrsort.cpp:40:34: error: ?max_align_t? is not a member of ?std?
return (sizeInBytes + sizeof(std::max_align_t) - 1) / sizeof(std::max_align_t);
^
icu69/common/uarrsort.cpp:40:34: note: suggested alternative:
In file included from /usr/include/c++/4.8.2/cstddef:42:0,
from icu69/common/uarrsort.cpp:21:
/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/stddef.h:425:3: note: ?max_align_t?
} max_align_t;
^
icu69/common/uarrsort.cpp:40:66: error: ?max_align_t? is not a member of ?std?
return (sizeInBytes + sizeof(std::max_align_t) - 1) / sizeof(std::max_align_t);
^
icu69/common/uarrsort.cpp:40:66: note: suggested alternative:
In file included from /usr/include/c++/4.8.2/cstddef:42:0,
from icu69/common/uarrsort.cpp:21:
/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/stddef.h:425:3: note: ?max_align_t?
} max_align_t;
^
icu69/common/uarrsort.cpp:41:1: error: body of constexpr function ?constexpr int32_t sizeInMaxAlignTs(int32_t)? not a return-statement
}
^
icu69/common/uarrsort.cpp: In function ?void insertionSort(char*, int32_t, int32_t, int32_t ()(const void, const void*, const void*), const void*, UErrorCode*)?:
icu69/common/uarrsort.cpp:144:26: error: ?max_align_t? is not a member of ?std?
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE)> v;
^
icu69/common/uarrsort.cpp:144:26: note: suggested alternative:
In file included from /usr/include/c++/4.8.2/cstddef:42:0,
from icu69/common/uarrsort.cpp:21:
/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/stddef.h:425:3: note: ?max_align_t?
} max_align_t;
^
icu69/common/uarrsort.cpp:144:26: error: ?max_align_t? is not a member of ?std?
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE)> v;
^
icu69/common/uarrsort.cpp:144:26: note: suggested alternative:
In file included from /usr/include/c++/4.8.2/cstddef:42:0,
from icu69/common/uarrsort.cpp:21:
/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/stddef.h:425:3: note: ?max_align_t?
} max_align_t;
^
icu69/common/uarrsort.cpp:144:77: error: template argument 1 is invalid
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE)> v;
^
icu69/common/uarrsort.cpp:144:76: error: ?constexpr int32_t sizeInMaxAlignTs(int32_t)? called in a constant expression
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE)> v;
^
icu69/common/uarrsort.cpp:144:77: note: in template argument for type ?int?
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE)> v;
^
icu69/common/uarrsort.cpp:144:80: error: invalid type in declaration before ?;? token
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE)> v;
^
icu69/common/uarrsort.cpp:145:40: error: request for member ?getCapacity? in ?v?, which is of non-class type ?int?
if (sizeInMaxAlignTs(itemSize) > v.getCapacity() &&
^
icu69/common/uarrsort.cpp:146:15: error: request for member ?resize? in ?v?, which is of non-class type ?int?
v.resize(sizeInMaxAlignTs(itemSize)) == nullptr) {
^
icu69/common/uarrsort.cpp:151:62: error: request for member ?getAlias? in ?v?, which is of non-class type ?int?
doInsertionSort(array, length, itemSize, cmp, context, v.getAlias());
^
icu69/common/uarrsort.cpp: In function ?void quickSort(char*, int32_t, int32_t, int32_t ()(const void, const void*, const void*), const void*, UErrorCode*)?:
icu69/common/uarrsort.cpp:238:26: error: ?max_align_t? is not a member of ?std?
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE) * 2> xw;
^
icu69/common/uarrsort.cpp:238:26: note: suggested alternative:
In file included from /usr/include/c++/4.8.2/cstddef:42:0,
from icu69/common/uarrsort.cpp:21:
/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/stddef.h:425:3: note: ?max_align_t?
} max_align_t;
^
icu69/common/uarrsort.cpp:238:26: error: ?max_align_t? is not a member of ?std?
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE) * 2> xw;
^
icu69/common/uarrsort.cpp:238:26: note: suggested alternative:
In file included from /usr/include/c++/4.8.2/cstddef:42:0,
from icu69/common/uarrsort.cpp:21:
/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include/stddef.h:425:3: note: ?max_align_t?
} max_align_t;
^
icu69/common/uarrsort.cpp:238:81: error: template argument 1 is invalid
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE) * 2> xw;
^
icu69/common/uarrsort.cpp:238:76: error: ?constexpr int32_t sizeInMaxAlignTs(int32_t)? called in a constant expression
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE) * 2> xw;
^
icu69/common/uarrsort.cpp:238:81: note: in template argument for type ?int?
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE) * 2> xw;
^
icu69/common/uarrsort.cpp:238:85: error: invalid type in declaration before ?;? token
icu::MaybeStackArray<std::max_align_t, sizeInMaxAlignTs(STACK_ITEM_SIZE) * 2> xw;
^
icu69/common/uarrsort.cpp:239:42: error: request for member ?getCapacity? in ?xw?, which is of non-class type ?int?
if(sizeInMaxAlignTs(itemSize)*2 > xw.getCapacity() &&
^
icu69/common/uarrsort.cpp:240:16: error: request for member ?resize? in ?xw?, which is of non-class type ?int?
xw.resize(sizeInMaxAlignTs(itemSize) * 2) == nullptr) {
^
icu69/common/uarrsort.cpp:246:21: error: request for member ?getAlias? in ?xw?, which is of non-class type ?int?
xw.getAlias(), xw.getAlias() + sizeInMaxAlignTs(itemSize));
^
icu69/common/uarrsort.cpp:246:36: error: request for member ?getAlias? in ?xw?, which is of non-class type ?int?
xw.getAlias(), xw.getAlias() + sizeInMaxAlignTs(itemSize));
^
make: *** [icu69/common/uarrsort.o] Error 1
ERROR: compilation failed for package ?stringi?

• removing ?/truba/home/XXX/R/x86_64-pc-linux-gnu-library/4.0/stringi?
  Warning in install.packages :
  installation of package ?stringi? had non-zero exit status

The downloaded source packages are in
?/tmp/RtmpltHYYB/downloaded_packages?`

I can not understand what is happening. I coul not find these errors on the google for fixing. Can you have any suggestion?

[gagolews]

Duplicate of #431.