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Timeseries tool #58

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merged 44 commits into from
Jul 31, 2022
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Quickbeasts51429
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Added time-series extraction tool.

@bgruening
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@Quickbeasts51429 very nice. Can you please add a shed.yml file?

@annefou
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annefou commented Jul 18, 2022

@bgruening

@Quickbeasts51429 very nice. Can you please add a shed.yml file?

We put everything with xarray tools. Also updating all xarray tools with the latest Python packages.

@bgruening
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Tests seem to fail with: Output collection 'output_dir': expected to have 5 elements, but it had 0.

@annefou
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annefou commented Jul 20, 2022

Tests seem to fail with: Output collection 'output_dir': expected to have 5 elements, but it had 0.

Ok. I will look at it. I probably messed up somewhere! Thanks a lot for pointing the error.

@annefou
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annefou commented Jul 25, 2022

Tests seem to fail with: Output collection 'output_dir': expected to have 5 elements, but it had 0.

@bgruening I think I finally understood what was wrong! I was trying to use a version of geopandas from conda-forge that is in cf-staging (for some reasons most of the geopandas versions are in cf-staging mode).

@bgruening
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Oh, that is unfortunate ... should we create a container?

@annefou
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annefou commented Jul 25, 2022

Oh, that is unfortunate ... should we create a container?

What do you mean? Sorry, I don't get it!

@bgruening
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If you really need the new version we can create a container and not use condor.

@annefou
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annefou commented Jul 25, 2022

If you really need the new version we can create a container and not use condor.

No we don't need a new version. It is not important. Thanks.

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LGTM!

@bgruening bgruening merged commit fd8ad4d into galaxyecology:master Jul 31, 2022
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3 participants