Comment on verbository changes

galaxyproject · Sep 15, 2020 · b504bc6 · b504bc6
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commit b504bc6
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diff --git a/lib/galaxy/datatypes/binary.py b/lib/galaxy/datatypes/binary.py
@@ -33,6 +33,8 @@
 from . import data, dataproviders
 
 log = logging.getLogger(__name__)
+# pysam 0.16.0.1 emits logs with the words error, this can confuse the stdout/stderr checkers.
+# Can be be removed once https://github.com/pysam-developers/pysam/issues/939 is resolved.
 pysam.set_verbosity(0)
 
 # Currently these supported binary data types must be manually set on upload

diff --git a/lib/galaxy/visualization/data_providers/genome.py b/lib/galaxy/visualization/data_providers/genome.py
@@ -27,6 +27,8 @@
 # Utility functions.
 #
 
+# pysam 0.16.0.1 emits logs with the words error, this can confuse the stdout/stderr checkers.
+# Can be be removed once https://github.com/pysam-developers/pysam/issues/939 is resolved.
 pysam.set_verbosity(0)
 PYSAM_INDEX_SYMLINK_NECESSARY = packaging.version.parse(pysam.__version__) <= packaging.version.parse('0.13.0')