-
Notifications
You must be signed in to change notification settings - Fork 86
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add "Methylation" to planemo shed_init categories #348
Comments
I think Planemo loads categories from MTS's API |
Then we can just add a category to the MTS API then. I'll get on that. |
I can do that for you. Give me name and description. |
"Epigenetics" is a better category apparently according to Mike. That will encapsulate a bunch of tools in along with methylation. |
And the description? |
"Tools for analyzing Epigenetic/Epigenomic datasets" |
@martenson Not sure about fetching the categories. See this one: https://github.com/galaxyproject/planemo/pull/285/files |
yep. they are hard coded in planemo. |
It is hardcoded so it works offline I think. Nevertheless the category needs to go to TS first. Done. |
Methylation would be nice if it were added. More tools are coming up in that area now.
Error: Invalid value for "--category": invalid choice: Methylation. (choose from Assembly, ChIP-seq, Combinatorial Selections, Computational chemistry, Convert Formats, Data Managers, Data Source, Fasta Manipulation, Fastq Manipulation, Genome-Wide Association Study, Genomic Interval Operations, Graphics, Imaging, Metabolomics, Metagenomics, Micro-array Analysis, Next Gen Mappers, Ontology Manipulation, Phylogenetics, Proteomics, RNA, SAM, Sequence Analysis, Statistics, Systems Biology, Text Manipulation, Tool Dependency Packages, Tool Generators, Transcriptomics, Variant Analysis, Visualization, Web Services)
The text was updated successfully, but these errors were encountered: