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Condafy data_manager_gemini_download tool #1202

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merged 1 commit into from
Apr 8, 2017

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gregvonkuster
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And update the gemini version to 0.19.1. This is the first step for this issue: #1130

@bgruening
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Thanks @gregvonkuster for working on this. Are you planning to put the tool in here as well? I don't think it makes sense to update the data manager without the tools.

@gregvonkuster
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Yes, I am taking look. Regarding the tabix requirement for the current tool, I'm wondering if I should create a conda recipe based on this: http://wiki.wubrowse.org/How_to_install_tabix (this is my current approach). However, it is also a component of htslib (https://github.com/samtools/htslib) but that package includes a lot more stuff. Let me know if you'd rather have me use it though.

@bgruening
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Depending on htslib is ok, I think.

@yhoogstrate
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This should be pending on: galaxyproject/galaxy#3686

@bgruening bgruening merged commit 27239c8 into galaxyproject:master Apr 8, 2017
@bgruening
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Thanks @gregvonkuster!

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4 participants