Some questions about tutorial preprocessing step

[HelloWorldLTY]

Hi Dr. Cao, sorry to disturb you. I met some problems when I run the tutorials:

I found that normalize_total will yield errors based on updated scanpy. I wonder if I use: normalize_per_cell is also ok or not. Thanks a lot.

[Jeff1995]

Thanks for the report! This is a known issue of scanpy 1.9.0 (scverse/scanpy#2210). You may try installing dask or upgrade to scanpy v1.9.1.

[Jeff1995]

For the record, using normalize_per_cell is also okay, except that the function seems to be deprecated.

[HelloWorldLTY]

Got it, many thanks for your help!