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missing parts of HDF5 #23
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Hi, |
Thanks for your quick answer ! The reason why i want to check hdf5 files validity is that, when a De Bruijn graph creation is interrupted, the created file is invalid and makes hdf5 crash when my program crash reads it. Some LoRDEC users are experiencing this kind of problem and i would like to prevent it by deleting any invalid hdf5 files and creating a new one. HDF5 lib is not throwing an exception that i could catch to handle invalid hdf5 file reading. By the way, i don't mind if the HDF5lib version stays old, i just would like it to include more 😉 |
hi @eneiluj, In an effort to not let our issues be unaddressed for more than 1 year, here is a fix :) Rayan |
I'm happily using GATB v1.4.1 for LoRDEC but i'm now annoyed because i can't find
H5File::isHdf5
function in included hdf5 lib.I fought hard to include the libhdf5 from my system (Ubuntu 18.04) but then there's a warning at execution :
and i get a
(core dumped)
.The text was updated successfully, but these errors were encountered: