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Fixing fatty aldehyde dehydrogenase terms. Fixes #28142
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@sjm41
sjm41 committed Jun 14, 2024
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3 changes: 3 additions & 0 deletions src/ontology/go-edit.obo
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Expand Up @@ -306809,6 +306809,7 @@ xref: MetaCyc:LONG-CHAIN-ALDEHYDE-DEHYDROGENASE-RXN
xref: RHEA:10652
xref: UM-BBD_reactionID:r1404
is_a: GO:0102673 ! fatty aldehyde dehydrogenase (NAD+) activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28142" xsd:anyURI

[Term]
id: GO:0050062
Expand Down Expand Up @@ -338122,6 +338123,7 @@ synonym: "medium-chain-aldehyde:NAD+ oxidoreductase activity" RELATED []
xref: RHEA:69763
is_a: GO:0102673 ! fatty aldehyde dehydrogenase (NAD+) activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28090" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28142" xsd:anyURI
creation_date: 2011-10-25T03:04:41Z

[Term]
Expand Down Expand Up @@ -433575,6 +433577,7 @@ synonym: "fatty aldehyde dehydrogenase activity" EXACT []
xref: MetaCyc:RXN-4142
xref: RHEA:49832 {source="skos:exactMatch"}
is_a: GO:0004029 ! aldehyde dehydrogenase (NAD+) activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28142" xsd:anyURI

[Term]
id: GO:0102674
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Here's a diff of how these changes impact the classified ontology:

Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/go.owl
  • Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-06-14/go.owl
  • Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/go.owl
  • Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-06-14/go.owl
  • Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl

Ontology imports

Ontology annotations

fatty aldehyde dehydrogenase (NAD+) activity http://purl.obolibrary.org/obo/GO_0102673

Removed

Added

long-chain fatty aldehyde dehydrogenase (NAD+) activity http://purl.obolibrary.org/obo/GO_0050061

Removed

Added

medium-chain fatty aldehyde dehydrogenase (NAD+) activity http://purl.obolibrary.org/obo/GO_0052814

Removed

Added

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