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reorganize pom.xml dependencies
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@kwestbrooks
kwestbrooks committed Oct 20, 2014
1 parent c6a5840 commit 727b29a
Showing 1 changed file with 55 additions and 38 deletions.
93 changes: 55 additions & 38 deletions pom.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -59,63 +59,78 @@

<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>${junit.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.google.api-client</groupId>
<artifactId>google-api-client</artifactId>
<version>${google.api.version}</version>
</dependency>
<dependency>
<groupId>com.google.oauth-client</groupId>
<artifactId>google-oauth-client-java6</artifactId>
<version>${google.api.version}</version>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
<version>18.0</version>
</dependency>
<dependency>
<groupId>com.google.api-client</groupId>
<artifactId>google-api-client-java6</artifactId>
<version>${google.api.version}</version>
</dependency>
<dependency>
<groupId>com.google.oauth-client</groupId>
<artifactId>google-oauth-client-jetty</artifactId>
<version>${google.api.version}</version>
<groupId>com.google.apis</groupId>
<artifactId>google-api-services-genomics</artifactId>
<version>${google.api.genomics.version}</version>
</dependency>
<dependency>
<groupId>com.google.http-client</groupId>
<artifactId>google-http-client-jackson2</artifactId>
<version>${google.api.version}</version>
<exclusions>
<exclusion>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>com.google.http-client</groupId>
<artifactId>google-http-client</artifactId>
<groupId>com.google.oauth-client</groupId>
<artifactId>google-oauth-client-jetty</artifactId>
<version>${google.api.version}</version>
</dependency>
<dependency>
<groupId>com.google.apis</groupId>
<artifactId>google-api-services-genomics</artifactId>
<version>${google.api.genomics.version}</version>
</dependency>
<dependency>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
<version>18.0</version>
<exclusions>
<exclusion>
<groupId>org.mortbay.jetty</groupId>
<artifactId>jetty</artifactId>
</exclusion>
</exclusions>
</dependency>
<!-- TODO: Replace with official Picard dependency once available -->
<dependency>
<groupId>org.utgenome.thirdparty</groupId>
<artifactId>picard</artifactId>
<version>${picard.version}</version>
<exclusions>
<exclusion>
<groupId>org.apache.ant</groupId>
<artifactId>ant</artifactId>
</exclusion>
<exclusion>
<groupId>org.xerial.snappy</groupId>
<artifactId>snappy-java</artifactId>
</exclusion>
<exclusion>
<groupId>org.apache.commons</groupId>
<artifactId>commons-jexl</artifactId>
</exclusion>
<exclusion>
<groupId>org.apache.ant</groupId>
<artifactId>ant-apache-bcel</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>1.9.5</version>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.11</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-core</artifactId>
<version>1.10.8</version>
<scope>test</scope>
</dependency>
</dependencies>

<profiles>
Expand Down Expand Up @@ -147,10 +162,10 @@
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<version>3.2</version>
<configuration>
<source>1.6</source>
<target>1.6</target>
<source>${java.version}</source>
<target>${java.version}</target>
</configuration>
</plugin>
<plugin>
Expand All @@ -173,10 +188,12 @@

<properties>
<junit.version>4.11</junit.version>
<google.api.version>1.18.0-rc</google.api.version>
<google.api.genomics.version>v1beta-rev34-1.19.0</google.api.genomics.version>
<google.api.version>1.19.0</google.api.version>
<google.api.genomics.version>v1beta-rev46-1.19.0</google.api.genomics.version>
<mockito.version>1.10.8</mockito.version>
<picard.version>1.102.0</picard.version>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.build.targetEncoding>UTF-8</project.build.targetEncoding>
<java.version>1.6</java.version>
</properties>
</project>
</project>

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