GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
Clone or download
Latest commit c5ba1de Oct 25, 2018

README.md

gffread

GFF/GTF parsing utility providing format conversions, region filtering, FASTA sequence extraction and more.

Use gffread -h to check the usage options.

Compiling this program from source requires my other code library, GCLib. It can be done like this:

  cd /some/build/dir
  git clone https://github.com/gpertea/gclib
  git clone https://github.com/gpertea/gffread
  cd gffread
  make release

This should build the gffread binary in the current directory.