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Merge pull request #37 from jjc2718/thumbnail
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12 changes: 7 additions & 5 deletions manuscript.html
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Expand All @@ -77,9 +79,9 @@ <h1 class="title">Gene expression and DNA methylation consistently predict cance
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This manuscript
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from <a href="https://github.com/greenelab/mpmp-manuscript/tree/015e2a55ce0835ffeefd39bbb123c7ff5205657e">greenelab/mpmp-manuscript@015e2a5</a>
on November 4, 2021.
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<h2 id="authors">Authors</h2>
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12 changes: 7 additions & 5 deletions manuscript.md
Expand Up @@ -54,11 +54,13 @@ header-includes: |-
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Expand All @@ -78,9 +80,9 @@ manubot-clear-requests-cache: false

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from [greenelab/mpmp-manuscript@015e2a5](https://github.com/greenelab/mpmp-manuscript/tree/015e2a55ce0835ffeefd39bbb123c7ff5205657e)
on November 4, 2021.
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2 changes: 1 addition & 1 deletion spelling-errors.txt
Expand Up @@ -81,7 +81,7 @@ mut
myeloid
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NRAS
Omics
omics
oncogenic
OV
overfitting
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13 changes: 7 additions & 6 deletions variables.json
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Expand Down Expand Up @@ -127,17 +127,18 @@
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