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susannasiebert committed Nov 21, 2016
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Installation
============

pVAC-Seq is written for Linux but some users have been able to run it successfully on Mac OS X. If you are using Windows you will need to set up a Linux environment, for example by setting up a virtual machine.

pVAC-Seq requires Python 3.5. Before running any installation steps check the Python version installed on your system:

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.. note::

Running the ``configure`` script requires a Python 2 environment. If you are currently emulating a Python 3 environment with Conda you will need to run ``source deactivate`` before executing the ``configure`` script.

.. note::

IEDB requires tcsh. You can install it by running `sudo apt get install tcsh`.

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