📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.
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mutations
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wisdom @ a400426
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README.md
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README.md

We studied the functional impact of alternative splicing alterations in cancer, with special interest on their potential as tumor drivers. The article is available in Cell Reports.

Graphical abstract

Analyses

Manuscript figures and tables

Switches

Mutations

Structure

Data

The data was generated by applying the spada and scudo pipelines to transcript expression data generated by the TCGA project. The files necessary to replicate all these analyses are available here; it must be placed in a data/ folder inside the project.

Dependencies

This Jupyter notebook requires the following external libraries to function: