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An example using PETSc as an external solver #12595

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fdkong opened this issue Dec 5, 2018 · 1 comment · Fixed by #14861 or #14998
Closed

An example using PETSc as an external solver #12595

fdkong opened this issue Dec 5, 2018 · 1 comment · Fixed by #14861 or #14998
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C: Framework P: normal A defect affecting operation with a low possibility of significantly affects. T: task An enhancement to the software.

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@fdkong
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fdkong commented Dec 5, 2018

Rationale

MOOSE can couple an external app in a different way. A new way is to use ExternalProblem that
calls an external solver and transfers data back-forward.

It is necessary to have an example to demonstrate this capability

Description

Create a PETSc example that uses an structured mesh to solve a simple time-dependent diffusion equation. We need to add a mirror of PETSc structured mesh DMDA in MOOSE. And then we can copy solution back-forward between PETSc and MOOSE.

Impact

It won't impact users.
fdkong added a commit to fdkong/moose that referenced this issue Dec 6, 2018
@fdkong
Added ExternalPETScProblem
963efae 
Refs idaholab#12595
@permcody permcody added C: Framework T: task An enhancement to the software. P: normal A defect affecting operation with a low possibility of significantly affects. labels Dec 10, 2018
fdkong added a commit to fdkong/moose that referenced this issue Jan 14, 2019
@fdkong
Added ExternalPETScProblem
a50503c 
Refs idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Jan 17, 2019
@fdkong
Create a new module: external_petsc_solver
00e1714 
This is used to demonstrate how to couple an external App through
a Moose App wrapper

Refs idaholab#12595
aeslaughter pushed a commit to aeslaughter/moose that referenced this issue Jan 22, 2019
@fdkong @aeslaughter
Create a new module: external_petsc_solver
8d37712 
This is used to demonstrate how to couple an external App through
a Moose App wrapper

Refs idaholab#12595
tophmatthews added a commit to tophmatthews/moose that referenced this issue Mar 16, 2019
@tophmatthews
Final removal of old thermal contact actions (idaholab#12595)
b8002fc
@fdkong
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fdkong commented Mar 20, 2019

The example has been added.

@fdkong fdkong closed this as completed Mar 20, 2019
fdkong added a commit to fdkong/moose that referenced this issue Mar 9, 2020
@fdkong
ExternalPetscSolverApp: add routines to mimic backup and restore
a822306 
Add PETSc routines to mimic application backup and restore

These routines serve as demo for other developers

Closes idaholab#12595
@fdkong fdkong mentioned this issue Mar 9, 2020
Merged
fdkong added a commit to fdkong/moose that referenced this issue Mar 10, 2020
@fdkong
ExternalPetscSolverApp: add routines to mimic backup and restore
c421a2f 
Add PETSc routines to mimic application backup and restore

These routines serve as demo for other developers

Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Mar 10, 2020
@fdkong
ExternalPetscSolverApp: add routines to mimic backup and restore
2cd8ee8 
Add PETSc routines to mimic application backup and restore

These routines serve as demo for other developers

Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Mar 31, 2020
@fdkong
Let external PETSc solver return the converged flag
1aa911f 
Closes idaholab#12595
@fdkong fdkong mentioned this issue Mar 31, 2020
Merged
fdkong added a commit to fdkong/moose that referenced this issue Apr 6, 2020
@fdkong
External petsc solver: work properly with sub_cycling=false
60c97f7 
Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Apr 7, 2020
@fdkong
external petsc solver: Added a multistep subcycling example
02bc232 
Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Apr 7, 2020
@fdkong
external petsc solver: Added a test where PETSc has a smaller dt
6248eab 
Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Apr 7, 2020
@fdkong
PETSc external solver: rename files to make more sense
146b5e8 
Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Apr 7, 2020
@fdkong
External Petsc Solver: Removed LIBMESH_HAVE_PETSC
abf556f 
and cleaned up the code

Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Apr 8, 2020
@fdkong
Petsc External Solver: PETSc works as a master app
3e5cafd 
Closes idaholab#12595
fdkong added a commit to fdkong/moose that referenced this issue Apr 8, 2020
@fdkong
Petsc External Solver: PETSc works as a master app
e3d41ac 
Closes idaholab#12595
killerpenguin12 pushed a commit to killerpenguin12/moose that referenced this issue Apr 13, 2020
@fdkong
Let external PETSc solver return the converged flag
0e543d4 
Closes idaholab#12595
killerpenguin12 pushed a commit to killerpenguin12/moose that referenced this issue Apr 13, 2020
@fdkong
External petsc solver: work properly with sub_cycling=false
c7e31e4 
Closes idaholab#12595
killerpenguin12 pushed a commit to killerpenguin12/moose that referenced this issue Apr 13, 2020
@fdkong
external petsc solver: Added a multistep subcycling example
fdd79df 
Closes idaholab#12595
killerpenguin12 pushed a commit to killerpenguin12/moose that referenced this issue Apr 13, 2020
@fdkong
external petsc solver: Added a test where PETSc has a smaller dt
ec85b16 
Closes idaholab#12595
killerpenguin12 pushed a commit to killerpenguin12/moose that referenced this issue Apr 13, 2020
@fdkong
PETSc external solver: rename files to make more sense
fbeb0e3 
Closes idaholab#12595
killerpenguin12 pushed a commit to killerpenguin12/moose that referenced this issue Apr 13, 2020
@fdkong
External Petsc Solver: Removed LIBMESH_HAVE_PETSC
abe3d3b 
and cleaned up the code

Closes idaholab#12595
killerpenguin12 pushed a commit to killerpenguin12/moose that referenced this issue Apr 13, 2020
@fdkong
Petsc External Solver: PETSc works as a master app
28795bc 
Closes idaholab#12595
crswong888 added a commit to crswong888/moose that referenced this issue Jun 4, 2021
@crswong888
Remove unnecessary StorkTestApp.C of "kind" counterpart when running …
4fdd137 
…stork.sh

(refs idaholab#9704 idaholab#12595)
@crswong888 crswong888 mentioned this issue Jun 4, 2021
Merged
crswong888 added a commit to crswong888/moose that referenced this issue Jun 7, 2021
@crswong888
Remove unnecessary StorkTestApp.C of "kind" counterpart when running …
7ac0a5f 
…stork.sh

(refs idaholab#9704 idaholab#12595)
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@permcody @fdkong