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Update dependent projects. #38

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tpietzsch opened this issue Jan 5, 2024 · 1 comment

Open

6 tasks

Tracked by

Update dependent projects. #38

tpietzsch opened this issue Jan 5, 2024 · 1 comment

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tpietzsch commented Jan 5, 2024 •

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Release a version of imglib2-ij with everything under package net.imglib2.ij.
Identify dependent projects.
For each dependent project: Use new imglib2-ij version in POM
For each dependent project: Update package for all occurrences of imglib2-ij classes.
For each dependent project: Create PR
Track PR progress until new imglib2-ij version can be propagated to pom-scijava

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tpietzsch mentioned this issue

Prepare imglib2-ij for modularization #37

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tpietzsch added the JPMS label

tpietzsch changed the title ~~Update dependant projects.~~ Update dependent projects.

tpietzsch self-assigned this

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tpietzsch commented Jan 5, 2024

Using the utilities from https://github.com/imglib/modularization, the following repositories were found to use classes from imglib2-ij:

https://github.com/imagej/imagej-legacy
https://github.com/imglib/imglib2-algorithm
https://github.com/imglib/imglib2-ij
https://github.com/fiji/Colocalisation_Analysis
https://github.com/fiji/FilamentDetector
https://github.com/fiji/Graph_Cut
https://github.com/fiji/Image_Expression_Parser
https://github.com/fiji/Kappa
https://github.com/fiji/SPIM_Registration
https://github.com/fiji/Stitching
https://github.com/fiji/Trainable_Segmentation
https://github.com/fiji/blockmatching
https://github.com/fiji/legacy-imglib1
https://github.com/saalfeldlab/bigwarp
https://github.com/saalfeldlab/z-spacing
https://github.com/bigdataviewer/bigdataviewer_fiji
https://github.com/trackmate-sc/TrackMate
https://github.com/trackmate-sc/TrackMate-Cellpose
https://github.com/trackmate-sc/TrackMate-Ilastik
https://github.com/trackmate-sc/TrackMate-MorphoLibJ
https://github.com/trackmate-sc/TrackMate-Oneat
https://github.com/trackmate-sc/TrackMate-Skeleton
https://github.com/trackmate-sc/TrackMate-StarDist
https://github.com/trackmate-sc/TrackMate-Weka
https://github.com/trakem2/TrakEM2
https://github.com/saalfeldlab/n5
https://github.com/saalfeldlab/n5-ij
https://github.com/saalfeldlab/n5-viewer
https://github.com/PreibischLab/BigStitcher
https://github.com/PreibischLab/multiview-reconstruction
https://github.com/PreibischLab/multiview-simulation
https://github.com/morphonets/SNT
https://github.com/fiji/MaMuT
https://github.com/juglab/labkit-pixel-classification
https://github.com/juglab/labkit-ui

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