205 migration #207
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205 migration #207
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deepakduggirala
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Apr 3, 2024
ri-pandey
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Apr 12, 2024
* WIP - worker adjustments for multiple duplicates * WIP - API adjustments for multiple duplicates * fixed overwritten state alert * added bundle cascade * fixed accept * changed button wording * check dataset state before acceptance or rejection * WIP - testing * fixed alert * persist action item instead of notification * show if action item is resolved * removed unused method * update action item states; conditionally disable controls on action items * removed onclick * update action item status * update version of rejected duplicates * fixed alerts logic * changed alerts logic * fetch notifications by active action items * trigger notification retrieval when action item is resolved * set max width on notification dropdown * updated workflow config for rejection * moved writes to API layer * refactored DB writes to API layer; added comment wrap plugin * added comment * use createMany with skipDuplicates * simplified acceptance into resumable steps * WIP - post duplicate by id * refactoring API and worker code * fixed URL; added max height * fixed duplicate creation * fixed state check * fixed create action item * added duplicate ready state * include duplications in analysis * use array * allow acceptance to resume * check paths before deletion * update action items before resuming workflow * ack notification before acceptance * use upsert * check exists before create * fix user connect query * added error for testing * fixed reject endpoint call * null check * skip rejecting duplicates * removed code for testing * reverted try catch * removed code for testing * logging * logging * Revert "removed code for testing" This reverts commit 092b7a2. * Revert "removed code for testing" This reverts commit a19adcc. * reverted rejection of other diplicates * modified checks after preflight * use separate checks pre-and post-accpetance * broke acceptance into resumable chunks * added logging * fixed return * fixed complete; state check * use .state * check correct state * commented out error * create new states * fixed conditions for alerts * fixed access * null checks * use is_deleted * removed error * enable resume * update state once * added workflow for reject * fixed rejection * logging * logging * logging * logging * added await * check states before purging resources * fixed state * error for testing * use separate states * fix condition * fixed condition * changes test condition * fixed condition * show active duplicates * removed test error * max h * show alerts * spacing * bold * clear input * font * class danger * hide default actions * close modal * refactored workflow * notification ack fix * fixed retrieval * fixed returns * changed to consider active action items * use reject * fixed returns * logging * active not. * filter notifications * fetch by status * added list component for duplicates * use new comp. * v-if * logging * fix * fixed cond. * show deleted * use right field * label * fixed state * added state checks for API layer * responsive * responsive * font * fix * fixed state check * refresh on error * WIP - lock actions * disabled controls; cleanup * disabled controls * lock workers based on state * disable deletions * fixed await * fixed imports * fixes * added state alert to DatasetDownloadModal.vue * modal fix * fetch in transaction * settings.json * docker compose nodemon * error * lock when state can'tbe determined * assume locked * no dismiss * lock delete * alerts * duplication includes * include duplications * param * fixed include * fixed alerts * button text * alerts * imports * alerts * reverted * test errors * check index before removal from list (#197) * Bump express from 4.18.2 to 4.19.2 in /secure_download Bumps [express](https://github.com/expressjs/express) from 4.18.2 to 4.19.2. - [Release notes](https://github.com/expressjs/express/releases) - [Changelog](https://github.com/expressjs/express/blob/master/History.md) - [Commits](expressjs/express@4.18.2...4.19.2) --- updated-dependencies: - dependency-name: express dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com> * Bump express from 4.18.3 to 4.19.2 in /api Bumps [express](https://github.com/expressjs/express) from 4.18.3 to 4.19.2. - [Release notes](https://github.com/expressjs/express/releases) - [Changelog](https://github.com/expressjs/express/blob/master/History.md) - [Commits](expressjs/express@4.18.3...4.19.2) --- updated-dependencies: - dependency-name: express dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com> * Rewrite bundle population and download logic (#202) * populate bundles * testing resuming wf * added logging * logging * logging * pause existing wfs * logging * unstage datasets first * testing resuming wf * changed is_staged cond. * removed error * fixed condition * logging * logging * delete pending wf * delete tasks too * refactoring * fixed init * fixed text * cleanup * use num_files check * use bundle_alias check * populate bundles and unstage files * migration * changed script name --------- Co-authored-by: scadev@colo25 <scadev@colo25.carbonate.uits.iu.edu> * test error * use array * disable notifications for users * create project-dataset associations for duplicates; filter out duplicates form search * allow modal dismiss * removed redundant update * removed test error * omit duplicates * omit duplicates * logging * omit deleted * lock state * loading * descending * Adjust docker compose for Dockerized secure_download API * make bundle workflows agnostic of filesystem path (#206) * make bundle workflows agnostic of filesystem path * fixed docs * testing --------- Co-authored-by: scadev@colo25 <scadev@colo25.carbonate.uits.iu.edu> * migration (#207) * removed test error * unrelated change * removed error * fixed utils * removed breakpoint * syntax fix * use correct path * use correct path * allow file browsing * disabled timeout * use ref * deleted file * file browser alert * syntax fix (#209) * removed path (#210) Co-authored-by: scadev@colo25 <scadev@colo25.carbonate.uits.iu.edu> * refresh after download * refactoring * refactored duplication code into service * imports * use download step * Revert "imports" This reverts commit 9ab5beb. * Revert "refactored duplication code into service" This reverts commit 79fe40b. * remove state check from download * added logging * refresh dataset after download is initiated * pass prop * logging * logging * emit event from intermediate component * logging * logging * catch event in table * refresh upon file download * check for roles * remove role check from review * check if ds is duplicate for write endpoints * case * some cleanup * removed redundant state checks * refactored into smaller modules * separated into methods * changed endpoints * logging * misc fixes * fix concat * moved states into constants * renaming; docs * cleanup * renamed table * added state diagram 1 * added more docs * deleted migrations * migration * updated docs * fix action item view * remove version from UI * updated docs --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: deepakduggirala <deepakduggirala@users.noreply.github.com> Co-authored-by: scadev@colo25 <scadev@colo25.carbonate.uits.iu.edu> Co-authored-by: scadev <scadev@bioloop-dev1.sca.iu.edu> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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