Adding wonderdump

jakobilab · Mar 10, 2023 · 759298a · 759298a
1 parent 2219954
commit 759298a
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Showing 2 changed files with 5 additions and 4 deletions.
diff --git a/.github/workflows/run_circtools_detect.yml b/.github/workflows/run_circtools_detect.yml
@@ -55,6 +55,7 @@ jobs:
          if [ "$RUNNER_OS" == "macOS" ]; then
            sudo xcode-select --switch /Library/Developer/CommandLineTools
          fi
+         python3 -m pip install numpy
          python3 -m pip install ./
     - name: Check if circtools starts
       run: |

diff --git a/setup.cfg b/setup.cfg
@@ -32,15 +32,15 @@ zip_safe = False
 platforms = Linux, Darwin
 include_package_data = True
 python_requires = >=3.7
-install_requires =  pysam==0.17.0
+install_requires =  pysam>=0.16.0.1
                     pybedtools>=0.7.10
-                    biopython==1.79
+                    biopython>=1.71
                     scipy>=0.19.0
-                    reportlab==3.5.68
+                    reportlab>=3.3.0
                     pandas>=0.25.0
                     statsmodels==0.9.0
                     numpy>=1.14.5
-                    HTSeq==2.0.0
+                    HTSeq>=0.11.0
 
 packages = find: