Mycorrhiza problem

[rhaphael]

I tried to run Mycorrhiza examples with Ubuntu 18.04.4 using the python script, but the following error occurs:

Outputting data in Nexus format.: 100%|████████| 90/90 [00:00<00:00, 939.25it/s]
Building network from file data/JN3L2X7MA3CPN57GYCSHLV21EUVZNONP.nex
SplitsTree -g -v -i /home/rhaphael/Desktop/Mycorrhiza/mycorrhiza-master/examples/data/JN3L2X7MA3CPN57GYCSHLV21EUVZNONP.nex
multiprocess.pool.RemoteTraceback:
"""
Traceback (most recent call last):
File "/home/rhaphael/.local/lib/python3.6/site-packages/multiprocess/pool.py", line 119, in worker
result = (True, func(*args, **kwds))
File "/home/rhaphael/.local/lib/python3.6/site-packages/multiprocess/pool.py", line 44, in mapstar
return list(map(*args))
File "/home/rhaphael/.local/lib/python3.6/site-packages/mycorrhiza/analysis/analysis.py", line 141, in func
return sn.execute_nexus_file(file)
File "/home/rhaphael/.local/lib/python3.6/site-packages/mycorrhiza/network/network.py", line 25, in execute_nexus_file
bash_nexus_file(filename)
File "/home/rhaphael/.local/lib/python3.6/site-packages/mycorrhiza/network/network.py", line 40, in bash_nexus_file
process = subprocess.Popen(bash_command.split(), stdout=subprocess.PIPE, shell=True if os_name == 'Windows' else False)
File "/usr/lib/python3.6/subprocess.py", line 729, in init
restore_signals, start_new_session)
File "/usr/lib/python3.6/subprocess.py", line 1364, in _execute_child
raise child_exception_type(errno_num, err_msg, err_filename)
FileNotFoundError: [Errno 2] No such file or directory: 'SplitsTree': 'SplitsTree'
"""
How do I solve this problem (error)?

[RGoess]

Have you installed Splitstree in your home directory? (http://www.splitstree.org/)

[mizubuti]

Yes, I had it installed on my home directory.

…

On Fri, May 29, 2020 at 2:15 PM Rose ***@***.***> wrote: Have you installed Splitstree in your home directory? ( http://www.splitstree.org/) — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#6 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AC3RS6CX2KWRT3IZNTWOT7LRT7USNANCNFSM4LPTLD5A> .