Getting direction (log2foldchange) of significantly different pathways and operons

[lwebercoralgirl]

Hello!

I was wondering if there was a way to obtain the direction (log2foldchange value) of the significantly different enriched pathways that are revealed from the FMAP_pathway.pl command. Is there a way to do this using the FMAP_module.pl command to?

Thanks!

[jiwoongbio]

Hello, There is a new release where FMAP_pathway.pl and FMAP_module.pl provide the up and down-regulated gene (orthology) counts as well. Thank you! Best Regards, Jiwoong

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On Tue, Feb 27, 2018 at 8:24 AM, lwebercoralgirl ***@***.***> wrote: Hello! I was wondering if there was a way to obtain the direction (log2foldchange value) of the significantly different enriched pathways that are revealed from the FMAP_pathway.pl command. Is there a way to do this using the FMAP_module.pl command to? Thanks! — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#8>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AHb3khFT01uw6luoHx81fY3fOe5SKsP2ks5tZBA5gaJpZM4SVBEk> .

[lwebercoralgirl]

Wonderful! Thank you!
Best,
Laura