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Pinned repositories

  1. PopPUNK

    PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

    Python 4 1

  2. mgalardini/pyseer

    SEER, reimplemented in python 🐍🔮

    Python 13 1

  3. tajima-D

    calculates tajima's D from bcftools query input

    C++ 1

  4. which_tree

    Testing of phylogenetic inference methods

    R 3 2

  5. seer

    sequence element (kmer) enrichment analysis

    C++ 19 8

542 contributions in the last year

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Contribution activity

September 2018

Created a pull request in bioconda/bioconda-recipes that received 7 comments

Add recipe for rapidnj v2.3.2

I have read the guidelines for bioconda recipes. This PR adds a new recipe. AFAIK, this recipe is directly relevant to the biological sciences

+43 −0 7 comments

Created an issue in B-UMMI/chewBBACA that received 12 comments

FileNotFound error

Hi, I am running chewBBACA version 2.0.12 (installed through conda), and am getting an error with AlleleCalli mode. I have downloaded the cgMLST sc…


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