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Pinned

  1. PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

    Python 56 15

  2. Library of sketching functions used by PopPUNK

    C++ 25 5

  3. Iterate multiple realisations of stochastic models

    C++ 13 1

  4. SEER, reimplemented in python 🐍🔮

    Python 66 23

  5. Mandrake 🌿/👨‍🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding

    Python 27 2

  6. Search engine for bacterial genomic information.

    JavaScript 1

629 contributions in the last year

Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Mon Wed Fri
Activity overview
Contributed to bacpop/PopPUNK, bacpop/pp-sketchlib, bacpop/bacpop-website and 37 other repositories

Contribution activity

December 2022

Opened 2 issues in 1 repository
6 contributions in private repositories Dec 1 – Dec 5

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