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Update README.md
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VPetukhov committed Jan 2, 2020
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Expand Up @@ -85,7 +85,8 @@ yum install openssl-devel libcurl-devel
If you are having trouble setting up pagoda2 on your system, an alternative approach to get pagoda on a mac or windows system is through a docker container. The docker distribution is current as of October 2018 and also includes the [Conos package](https://github.com/hms-dbmi/conos). To start a docker container, first [install docker](https://docs.docker.com/install/) on your platform and then start the pagoda container with the following command in the shell:

```
docker run -p 8787:8787 docker.io/barkasn/pagoda2
docker run -p 8787:8787 vpetukhov/pagoda2:latest
```
The first time you run the command it will download several images so make sure that you have fast internet access setup. You can then point your browser to http://localhost:8787/ to get an Rstudio environment with pagoda2 (and conos) installed (log in using credentials rstudio/pass). Explore the docker [--mount option](https://docs.docker.com/storage/volumes/) to allow access of the docker image to your local files.

The first time you run the command it will download several images so make sure that you have fast internet access setup. You can then point your browser to http://localhost:8787/ to get an Rstudio environment with pagoda2 installed (log in using credentials rstudio/pass). Explore the docker [--mount option](https://docs.docker.com/storage/volumes/) to allow access of the docker image to your local files.

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