msp libraries building method

[mantouRobot]

Dear @gessulat,

I found the data of Prosit is everywhere ^_^. The spectra library files *.msp are deposited in the Sync + Share.

But I can not find the description of the process to build the library. In addition, Can msp libraries derive the hdf5 training dataset deposited in figshare?

Thanks.

[gessulat]

Hi @mantouRobot,

If you are using Prosit locally, please see how to get MSP files with the local server version here:
https://github.com/kusterlab/prosit#example

If you are using the online Prosit web service (www.proteomicsdb.org/prosit/), please select the .MSP format before submitting the task.

If you are looking for the code doing the transformation, have a look here:
https://github.com/kusterlab/prosit/blob/master/prosit/converters/msp.py