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workflow runs into error in OTU step with sumaclust, because *unique.sort.fasta has no size argument in the header, which is required by the command. The size could be added to the fasta file or the "-s size" could be removed from l. 118 of the OTU script.
(second option would mean sorting by count, which is reasonable; the workflow runs to the end with default setting) @lentendu , you decide.
The text was updated successfully, but these errors were encountered:
In GitLab by @ahb-ufz on Sep 18, 2018, 12:02
workflow runs into error in OTU step with sumaclust, because *unique.sort.fasta has no size argument in the header, which is required by the command. The size could be added to the fasta file or the "-s size" could be removed from l. 118 of the OTU script.
(second option would mean sorting by count, which is reasonable; the workflow runs to the end with default setting)
@lentendu , you decide.
The text was updated successfully, but these errors were encountered: