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Check if all genes are connected #16

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llrs opened this issue Oct 30, 2018 · 2 comments
Open

Check if all genes are connected #16

llrs opened this issue Oct 30, 2018 · 2 comments
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enhancement 🍦 New feature or request

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llrs commented Oct 30, 2018

From the https://github.com/llrs/integration-helper see the correct function (although it would require some tweaking to improve efficiency to the scales of gene sets)

@llrs llrs added the enhancement 🍦 New feature or request label Oct 30, 2018
@llrs llrs self-assigned this Oct 30, 2018
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llrs commented Nov 2, 2018

Best path is to diagonalize and then compute the S (by adding all the diagonal matrix ( r-r^n)/(1-r). It might take time but there doesn't seem to be any other shortcut.

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llrs commented Nov 25, 2018

I don't know why but it returns NA because Reduce('+', red) returns all NaN

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