Missing files?

[pimatysiak]

Hi, thank you for providing your code here.

However in attempting to test it I couldn't find the training files you mention in your readme, namely train_RTPI_v3.py and train_composite_encoder.py. Would you be so kind at so provide an alternative for us to try your code?

Thank you

[m1nhengChen]

Hi, @pimatysiak ,

Sorry for the delay in responding to your issue. As a matter of fact, the code for training is not complex to implement as described in our paper. By the way, I have uploaded the necessary files for training into the repository. I hope it will be helpful for your work.

[pimatysiak]

Hi Minheng, Thank you for taking the time to update your repo. I understand this may not be difficult to implement for somebody like you with your experience with machine learning code, but as a simple biomedical engineer I do not have the same skillset :) I tried running your new code to attempt training but it seems some functions are not available? In particular I am looking at one called "ProST_drr_generator" which is not included in your module.py file. Perhaps the github repo has an outdated version of that file? Additionally, although I could fix that easily, you may want to mention in your requirements file that you use the external library 'einops' as well. Thank you again and looking forward to your reply. Pierre

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________________________________ From: mh_chen ***@***.***> Sent: Saturday, December 16, 2023 3:07 PM To: m1nhengChen/SOPI ***@***.***> Cc: Pierre Matysiak ***@***.***>; Mention ***@***.***> Subject: Re: [m1nhengChen/SOPI] Missing files? (Issue #2) [EXTERNAL EMAIL] DO NOT CLICK links or attachments unless you recognize the sender and know the content is safe. Hi, @pimatysiak<https://github.com/pimatysiak> , Sorry for the delay in responding to your issue. As a matter of fact, the code for training is not complex to implement as described in our paper. By the way, I have uploaded the necessary files for training onto the repository. I hope it will be helpful for your work. — Reply to this email directly, view it on GitHub<#2 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/BBP3J4CHZGH3JHWERTDEOD3YJWTL7AVCNFSM6AAAAAA4JHHCTKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQNJYHAZDONJUGA>. You are receiving this because you were mentioned.Message ID: ***@***.***>