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*** This is BWISE - High order De Bruijn graph assembler ***
The command line was: /home/jit/anaconda3/bin/bwise -x interleaved.fa -o bwise_assembly
[Warning] bwise_assembly directory already exists, BWISE will use it.
Results will be stored in: /home/jit/Downloads/setu/bwise_assembly
[17:37:32 16/05/2020] --> Starting Graph construction and Super Reads generation...
#Graph 1: Construction...
#Current date & time Sat May 16 17:37:32 2020
bcalm -max-memory 10000 -in /home/jit/Downloads/setu/bwise_assembly/bankBcalm.txt -kmer-size 63 -abundance-min 3 -out /home/jit/Downloads/setu/bwise_assembly/out -nb-cores 20
[ERROR] There was a problem generating "/home/jit/Downloads/setu/bwise_assembly/out.unitigs.fa".
[FATAL ERROR] One or several files could not be generated.
To find out why, try Bwise --help and/or check the logs files of the various steps of the pipeline (logs/logBloocoo, logs/logBcalm, logs/logTips, logs/logBgreat, logs/logK2000).
`
The text was updated successfully, but these errors were encountered:
Bwise terminated at Graph 1: Construction steps. All the log files are empty !
Bwise version used : https://anaconda.org/bioconda/bwise
`(base) jit@jit-HP-Pro-3335-MT:~/Downloads/setu$ bwise -x interleaved.fa -o bwise_assembly
*** This is BWISE - High order De Bruijn graph assembler ***
The command line was: /home/jit/anaconda3/bin/bwise -x interleaved.fa -o bwise_assembly
[Warning] bwise_assembly directory already exists, BWISE will use it.
Results will be stored in: /home/jit/Downloads/setu/bwise_assembly
[17:37:32 16/05/2020] --> Starting Graph construction and Super Reads generation...
#Graph 1: Construction...
#Current date & time Sat May 16 17:37:32 2020
bcalm -max-memory 10000 -in /home/jit/Downloads/setu/bwise_assembly/bankBcalm.txt -kmer-size 63 -abundance-min 3 -out /home/jit/Downloads/setu/bwise_assembly/out -nb-cores 20
[ERROR] There was a problem generating "/home/jit/Downloads/setu/bwise_assembly/out.unitigs.fa".
[FATAL ERROR] One or several files could not be generated.
To find out why, try
Bwise --help
and/or check the logs files of the various steps of the pipeline (logs/logBloocoo, logs/logBcalm, logs/logTips, logs/logBgreat, logs/logK2000).`
The text was updated successfully, but these errors were encountered: