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Regardless of --jobinterval setting, mrp will now never have more than one
queue command pending at a time, to avoid overloading the job server or
equivalent.
mrp will now shut down if the pipestance log file has been deleted, even if
a new one has been created in its place. This prevents bad behavior in the
somewhat common case where the pipestance directory (including the log) and
lock files) has been deleted.
The script to check the status of the job queue on SGE has been modified to
be faster and use less ram.
Fixed a bug in handling of the retain parameter for pipelines.
The mount options are now reported for the mounts on which the pipestance and
binary directories are located.
Memory cgroups limits are now detected, reported, and used as default limits
where applicable. This should be especially helpful for users submitting mrp
to a cluster such as SLURM which uses memory cgroups to prevent jobs from
using too much memory, by preventing mrp from trying to use more than the
job's allowance.
Martian can now (experimentally) be built experimentally with bazel.