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Error with BGC0001125 #19

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zdk123 opened this issue Jan 7, 2020 · 0 comments
Open

Error with BGC0001125 #19

zdk123 opened this issue Jan 7, 2020 · 0 comments
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@kblin
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entry error Something is wrong with an entry tricky issue No straightforward fix for this issue
Milestone
Release 3.0

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@zdk123
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zdk123 commented Jan 7, 2020

Affected BGC
BGC0001125 OR
BGC0001951-BGC0001953

Describe the error
Puwainaphycin/Minutissamide clusters clearly have genes with KS domains. A 2014 Plos One paper classifies BGC0001125 as NRP/PKS. However, clusters BGC0001951-BGC0001953 are listed on Mibig as only NRP. A 2019 AEM paper discusses the PKS genes in the abstract but only uses lipopeptides classifier. This is a judgement call, but should be consistent.
@zdk123 zdk123 added the entry error Something is wrong with an entry label Jan 7, 2020
@kblin kblin self-assigned this Jan 10, 2020
@kblin kblin added this to the Relese 2.1 milestone Jan 10, 2020
@kblin kblin added the tricky issue No straightforward fix for this issue label Aug 11, 2022
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entry error Something is wrong with an entry tricky issue No straightforward fix for this issue
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Milestone
Release 3.0
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@kblin @zdk123