Created task to print correlations by gene data

analysis/004_compare_mutation_and_cost/analysis.rake

@@ -10,4 +10,19 @@ namespace '004' do
     Alignment.each {|align| CorrelationByGene.estimate_for(align)}
   end
 
+  desc 'Print gene correlation data'
+  task :print_gene_correlation_data do
+    target = File.join(File.dirname(__FILE__),'r','data','correlation_by_gene.csv')
+    FasterCSV.open(target,'w') do |csv|
+      CorrelationByGene.each do |cor|
+        csv << [
+          cor.alignment.gene.name,
+          cor.condition.name,
+          cor.cost_type.name,
+          cor.r
+        ]
+      end
+    end
+  end
+
 end