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[ci] move Solaris and valgrind test steps into scripts #4503

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merged 5 commits into from
Aug 10, 2021

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jameslamb
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#3946 introduces two new Suggests-level dependencies for the R package.

To run the Solaris and valgrind tests successfully, those dependencies need to be added to the jobs for those tests (https://github.com/microsoft/LightGBM/blob/master/.github/workflows/r_solaris.yml and https://github.com/microsoft/LightGBM/blob/master/.github/workflows/r_valgrind.yml).

This creates an interesting challenge. Right now changes like that need to be made in the workflow files in .github/workflows/, but when those jobs are triggered by comments they source those configs from master (#4397 (comment)).

This PR proposes moving more of the logic for those checks into scripts in .ci/. That will make it possible to test the following types of changes to the Solaris and valgrind jobs before merging them:

  • adding or removing dependencies installed with install.packages()
  • changing arguments to install.packages() (e.g. [ci] parallelize R package installs in CI jobs #4198)
  • changing apt-get install'd dependencies for the Solaris checks
  • changing arguments passed to Rdvalgrind CMD INSTALL in the valgrind checks

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Really useful refactoring! Thanks!

Please check my initial comments below.

libxml2-dev \
libssl-dev

log_file="$GITHUB_WORKSPACE/rhub_logs.txt"
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We try to not use CI service dependable env variables in bash scripts (try to search for GITHUB_WORKSPACE: it is used only in config yml files).

I guess we can switch to relative paths here just like in test_r_package_valgrind.sh

ALL_LOGS_FILE="out.log"
VALGRIND_LOGS_FILE="valgrind-logs.log"
RDvalgrind \
--no-readline \
--vanilla \
-d "valgrind --tool=memcheck --leak-check=full --track-origins=yes" \
-f testthat.R \
> ${ALL_LOGS_FILE} 2>&1 || exit -1

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good point! fixed in 10deff6

.github/workflows/r_solaris.yml Outdated Show resolved Hide resolved
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LGTM! Let's check these changes in a next PR.

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This pull request has been automatically locked since there has not been any recent activity since it was closed. To start a new related discussion, open a new issue at https://github.com/microsoft/LightGBM/issues including a reference to this.

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