Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Heatmap Pre-User Testing Number Seven Improvements #5

Closed
3 tasks done
FMCalisto opened this issue Apr 15, 2019 · 1 comment
Closed
3 tasks done

Heatmap Pre-User Testing Number Seven Improvements #5

FMCalisto opened this issue Apr 15, 2019 · 1 comment
Assignees
Labels
available Status: Available feature Type: Feature when we have a new feature medium Priority: Medium priority issue
Projects
Milestone

Comments

@FMCalisto
Copy link
Member

FMCalisto commented Apr 15, 2019

On an early phase (issue #1), we developed an Assistant feature, called heatmaps, to help us eXplaining (XAI) the results of our autonomous AI-Assisted methods across the breast cancer diagnosis. Such automation is crucial since it reduces the inspection performed by the radiologists, that is still rudimentary in current clinical setups. Therefore, the methods eXplainability (XAI) will provide radiologists answers for the recommendations and decisions made.

Based on the literature, we plan to improve and prepare our Heatmap prototype for future user tests, within a context of scaling our solution. We aim to understand how clinical institutions can use our system with impactful healthcare systems.

In this set of issues, our requirements are as follows. A twofold of conditions must be addressed across the final solution. We aim to achieve some prototype improvements to support the future of our Heatmap prototype user tests, more detailed below.

List of enhancing features from pre-user testing phases:

The first issue, titled as Importing Randomly N Patients Routine from M Patients Set Functionality (issue #6), is based on early developments (issues #18 and #19 of the prototype-multi-modality-assistant repository). The idea is to import and bring functionality regarding the random control of the way that the studyList.json file is generating the Patient ID respectively. We need to force the studyList.json file to generate only N patients, from a set of M patients.

The second issue, titled as Create Basic Image Processing Source (issue #7), aims at developing a new repository, as well as the source code. We will need to develop several routines to read .dcm image, and from this, apply the heatmapping strategy.

The third issue, titles as Basic Overlay (issue #8), aims at developing the overlay functionality of the medical images. We will need to develop several routines to read the images directly from the WADO (Orthanc) server and the ".png" images, and from this, overlay the several ".png" images (i.e., heatmaps) within the image on the WADO (Orthanc) server.

@FMCalisto
Copy link
Member Author

The issue is already implemented. Therefore, it will be Closed manually.

Tasks automation moved this from To do to Done Oct 11, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
available Status: Available feature Type: Feature when we have a new feature medium Priority: Medium priority issue
Projects
Tasks
  
Done
Development

No branches or pull requests

1 participant