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lepao.owl
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lepao.owl
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<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/lepao.owl#"
xml:base="http://purl.obolibrary.org/obo/lepao.owl"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:go="http://purl.obolibrary.org/obo/go#"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:core="http://purl.obolibrary.org/obo/uberon/core#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:pato="http://purl.obolibrary.org/obo/pato#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:core1="http://purl.obolibrary.org/obo/core#"
xmlns:swrla="http://swrl.stanford.edu/ontologies/3.3/swrla.owl#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:terms="http://purl.org/dc/terms/"
xmlns:ubprop="http://purl.obolibrary.org/obo/ubprop#"
xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/lepao.owl">
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/lepao/releases/2021-01-19/lepao.owl"/>
<dc:description>None</dc:description>
<dc:title>lepidoptera anatomy ontology</dc:title>
<terms:license rdf:resource="https://creativecommons.org/licenses/unspecified"/>
<owl:versionInfo rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2021-01-19</owl:versionInfo>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/AISM_0000171 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/AISM_0000171">
<rdfs:label xml:lang="en">sensu</rdfs:label>
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/AISM_0000171"/>
<owl:annotatedProperty rdf:resource="http://www.w3.org/2000/01/rdf-schema#label"/>
<owl:annotatedTarget xml:lang="en">sensu</owl:annotatedTarget>
<obo:IAO_0000115>This annotation property defines a "sensu", that is the combination of a reference, label and class (represented by verbatime and logic definitions). Given this model, independent observations can be inferred across to compute synonymy (multiple labels attached to one ), homonymy (one label is attached to multiple classes). https://doi.org/10.1371/journal.pone.0015991.g004
This annotation property is on the label of a class in owl</obo:IAO_0000115>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000179 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000179"/>
<!-- http://purl.obolibrary.org/obo/BFO_0000180 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000180"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000111 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000112 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000114 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115">
<obo:IAO_0000111 xml:lang="en">definition</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">2012-04-05:
Barry Smith
The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible.
Can you fix to something like:
A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property.
Alan Ruttenberg
Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria.
On the specifics of the proposed definition:
We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition.
Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable.
We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. </obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>definition</rdfs:label>
<rdfs:label xml:lang="en">definition</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000116 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000116"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000117 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000118 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000119 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000232 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000232">
<obo:IAO_0000111 xml:lang="en">curator note</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">An administrative note of use for a curator but of no use for a user</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<oboInOwl:hasDbXref>IAO:0000232</oboInOwl:hasDbXref>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>curator_notes</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>curator_notes</oboInOwl:shorthand>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>curator note</rdfs:label>
<rdfs:label xml:lang="en">curator note</rdfs:label>
<rdfs:label>curator notes</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000233 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000233"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000412 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000412"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000424 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000424"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000589 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000589"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000600 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000600"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000601 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000601"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000602 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000602"/>
<!-- http://purl.obolibrary.org/obo/IAO_0010000 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0010000"/>
<!-- http://purl.obolibrary.org/obo/IAO_isReversiblePropertyChain -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_isReversiblePropertyChain"/>
<!-- http://purl.obolibrary.org/obo/RO_0001900 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001900"/>
<!-- http://purl.obolibrary.org/obo/RO_0002174 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002174"/>
<!-- http://purl.obolibrary.org/obo/RO_0002175 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002175"/>
<!-- http://purl.obolibrary.org/obo/RO_0002259 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002259">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002575 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002575"/>
<!-- http://purl.obolibrary.org/obo/RO_0002581 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002581">
<obo:IAO_0000115>If R <- P o Q is a defining property chain axiom, then it also holds that R -> P o Q. Note that this cannot be expressed directly in OWL</obo:IAO_0000115>
<rdfs:label>is a defining property chain axiom</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002582 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002582">
<obo:IAO_0000115>If R <- P o Q is a defining property chain axiom, then (1) R -> P o Q holds and (2) Q is either reflexive or locally reflexive. A corollary of this is that P SubPropertyOf R.</obo:IAO_0000115>
<rdfs:label>is a defining property chain axiom where second argument is reflexive</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002604 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002604"/>
<!-- http://purl.obolibrary.org/obo/RO_0004049 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0004049"/>
<!-- http://purl.obolibrary.org/obo/RO_0004050 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0004050"/>
<!-- http://purl.obolibrary.org/obo/RO_0040042 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0040042"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000001 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000001"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000002 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000002"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000003 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000003"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000006 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000006"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000007 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000007"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000008 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000008"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000009 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000009"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000010 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000010"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000011 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000011"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000012 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000012"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000013 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000013"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000103 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000103"/>
<!-- http://purl.obolibrary.org/obo/UBPROP_0000202 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000202"/>
<!-- http://purl.obolibrary.org/obo/core#provenance_notes -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/core#provenance_notes"/>
<!-- http://purl.obolibrary.org/obo/go#goslim_aspergillus -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_aspergillus">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_candida -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_candida">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_chembl -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_chembl">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_generic -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_generic">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_metagenomics -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_metagenomics">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_pir -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_pir">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_plant -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_plant">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_pombe -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_pombe">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/go#goslim_yeast -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/go#goslim_yeast">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#abnormal_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#abnormal_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#attribute_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#attribute_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#cell_quality -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#cell_quality">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#disposition_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#disposition_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#mpath_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#mpath_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#relational_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#relational_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#scalar_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#scalar_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/pato#value_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/pato#value_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/ro/subsets#ro-eco -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/ro/subsets#ro-eco">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#cumbo -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#cumbo">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#developmental_classification -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#developmental_classification">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#early_development -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#early_development">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#efo_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#efo_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#emapa_ehdaa2 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#emapa_ehdaa2">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#functional_classification -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#functional_classification">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#grouping_class -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#grouping_class">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#inconsistent_with_fma -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#inconsistent_with_fma">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#major_organ -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#major_organ">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#non_informative -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#non_informative">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#organ_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#organ_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#pheno_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#pheno_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#phenotype_rcn -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#phenotype_rcn">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#uberon_slim -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#uberon_slim">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#upper_level -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#upper_level">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/uberon/core#vertebrate_core -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#vertebrate_core">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/ubprop#_upper_level -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/ubprop#_upper_level">
<rdfs:subPropertyOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/elements/1.1/contributor -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/contributor">
<oboInOwl:hasDbXref rdf:resource="http://purl.org/dc/elements/1.1/contributor"/>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>dc-contributor</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>dc-contributor</oboInOwl:shorthand>
<rdfs:label>contributor</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/elements/1.1/description -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/description">
<oboInOwl:hasDbXref rdf:resource="http://purl.org/dc/elements/1.1/description"/>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>dc-description</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>dc-description</oboInOwl:shorthand>
<rdfs:label>description</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/elements/1.1/source -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/source"/>
<!-- http://purl.org/dc/elements/1.1/title -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/title">
<oboInOwl:hasDbXref rdf:resource="http://purl.org/dc/elements/1.1/title"/>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>dc-title</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>dc-title</oboInOwl:shorthand>
<rdfs:label>title</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/terms/creator -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/creator"/>
<!-- http://purl.org/dc/terms/license -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/license">
<oboInOwl:hasDbXref rdf:resource="http://purl.org/dc/terms/license"/>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>dcterms-license</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>dcterms-license</oboInOwl:shorthand>
<rdfs:label>license</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/terms/source -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/source"/>
<!-- http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled -->
<owl:AnnotationProperty rdf:about="http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled"/>
<!-- http://www.geneontology.org/formats/oboInOwl#SubsetProperty -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#SubsetProperty">
<rdfs:label>subset_property</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#consistent_with -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#consistent_with"/>
<!-- http://www.geneontology.org/formats/oboInOwl#created_by -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#created_by"/>
<!-- http://www.geneontology.org/formats/oboInOwl#creation_date -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#creation_date"/>
<!-- http://www.geneontology.org/formats/oboInOwl#date_retrieved -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#date_retrieved"/>
<!-- http://www.geneontology.org/formats/oboInOwl#evidence -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#evidence"/>
<!-- http://www.geneontology.org/formats/oboInOwl#external_class -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#external_class"/>
<!-- http://www.geneontology.org/formats/oboInOwl#external_ontology -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#external_ontology"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasAlternativeId -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasAlternativeId"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDbXref -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDbXref"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasExactSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasOBONamespace -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBONamespace"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasSynonymType -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasSynonymType"/>
<!-- http://www.geneontology.org/formats/oboInOwl#id -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id"/>
<!-- http://www.geneontology.org/formats/oboInOwl#inSubset -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset"/>
<!-- http://www.geneontology.org/formats/oboInOwl#inconsistent_with -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inconsistent_with"/>
<!-- http://www.geneontology.org/formats/oboInOwl#is_inferred -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#is_inferred"/>
<!-- http://www.geneontology.org/formats/oboInOwl#is_metadata_tag -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#is_metadata_tag"/>
<!-- http://www.geneontology.org/formats/oboInOwl#is_transitive -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#is_transitive"/>
<!-- http://www.geneontology.org/formats/oboInOwl#notes -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#notes"/>
<!-- http://www.geneontology.org/formats/oboInOwl#ontology -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#ontology"/>
<!-- http://www.geneontology.org/formats/oboInOwl#shorthand -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#shorthand"/>
<!-- http://www.geneontology.org/formats/oboInOwl#source -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#source"/>
<!-- http://www.geneontology.org/formats/oboInOwl#taxon -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#taxon"/>
<!-- http://www.geneontology.org/formats/oboInOwl#todo -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#todo"/>
<!-- http://www.geneontology.org/formats/oboInOwl#version -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#version"/>
<!-- http://www.w3.org/2000/01/rdf-schema#comment -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#comment"/>
<!-- http://www.w3.org/2000/01/rdf-schema#label -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#label"/>
<!-- http://xmlns.com/foaf/0.1/depicted_by -->
<owl:AnnotationProperty rdf:about="http://xmlns.com/foaf/0.1/depicted_by"/>
<!-- http://xmlns.com/foaf/0.1/page -->
<owl:AnnotationProperty rdf:about="http://xmlns.com/foaf/0.1/page"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/AISM_0000011 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/AISM_0000011">
<rdfs:label xml:lang="en">lateral_to</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/AISM_0000012 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/AISM_0000012">
<rdfs:label xml:lang="en">medial_to</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/AISM_0000078 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/AISM_0000078">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002150"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/AISM_0000079"/>
<rdfs:label xml:lang="en">encircles</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/AISM_0000079 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/AISM_0000079">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002150"/>
<rdfs:label xml:lang="en">encircled by</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000050 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000050">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002131"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<obo:IAO_0000111 xml:lang="en">is part of</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">my brain is part of my body (continuant parthood, two material entities)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this day is part of this year (occurrent parthood)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a core relation that holds between a part and its whole</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.)
A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">part_of</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<obo:RO_0040042 rdf:resource="http://purl.obolibrary.org/obo/BFO_0000017"/>