add CML action to run the GCBM simulation (#132)

* reproduce FLINT.Cloud apis * changed form data paths * example sim report using cml * Update cml-report.yml * Update cml-report.yml * Update cml-report.yml * Update cml-report.yml * Update cml-report.yml * Update cml-report.yml * Update cml-report.yml * test if cml is setup right * add cml script * Update cml-report.yml * changed file paths to not show local directories * update cml report * setup gha script to show summary * Update cml-report.yml * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * setup GCBM summary * update cml_report script * update cml script * update cml script * update cml script * update cml script * update cml script * update cml script * update python script * Update cml-report.yml * Update cml-report.yml * run model summary * add sim start and end dates * add action to create new sim * run api and get list of saved simulations * run api and get list of saved simulations * run api and get list of saved simulations * run api and get list of saved simulations * run api and get list of saved simulations * run api and get list of saved simulations * run api and get list of saved simulations * run api and get list of saved simulations * run api and get list of saved simulations * create new sim and check if it works * add script to get log files in CML action * add script to get log files in CML action * fix some paths and get log files in CML action * test if ci has docker * test curl on gcbm api * test curl on gcbm api * update curl command * add cli to api * cli instead of curl to interact with gcbm api * cli instead of curl to interact with gcbm api * Managed to retrieve logs from sim run localy * check if cURL works with api * check if cURL works with api in actions * check if cURL works with public ip * check if it works with webrequest * check if it works with webrequest * check if it works with webrequest * check right ports * test in port 5000 * test ports * test ports * check if simulation runs * check if simulation runs * check if simulation runs * check if simulation runs * check if sim runs * check if sim runs * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim run right * check if sim runs using python script * check if sim runs using python script * check if sim runs using python script * check if sim runs using python script * check if sim run smoothly * check if sim runs smoothly * check if sim runs smoothly * check if sim runs using a python script * check if sim runs using moja.cli * check if sim runs using moja.cli * check if sim runs using moja.cli no tty * sim runs but zip file not found * copy output instead using docker cp instead of /download * sim runs smoothly using partially gcbm-api and moja.cli and using cml to send a verification comment * sim runs smoothly using partially gcbm-api and moja.cli and using cml to send a verification comment * check if sim runs with threading * check if sim runs with threading * added CompileResults repo to rest_api_gcbm * check sim with GCBM.CompileResults repo * fix typo in cml_report.yml line 104 * add cml comment * check if annual_summaries.py runs properly * check if annual_summaries.py runs properly * compile results runs but cml comment cant display plot * check if total biomass plot is displayed * display sim log * display sim log * change cml-report to run on push/master and pr/master * update cml comment * update cml comment Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update cml comment Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update cml comment Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update cml comment Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update comment Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * added job to upload logs as artifact Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * fix typo in line 103 cml-report.yml Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check if download works Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check correct paths Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check why curl 26 in upload Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * chech verbose cURL Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * upload via python Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * upload via python Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * upload via python Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * upload via python Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * upload via python Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * upload via python Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update cml-report Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * add requests module Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * new upload params check if it runs Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * new upload params check if it runs Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * having issues in dynamic endpoint Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * remove run job on push Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * apply requested changes Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * unzip zDemo_Run and templates before running api Signed-off-by: radistoubalidis <rtoumpalidis@gmail.com> * unzip form files before building api Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * add Dockerfile.cml Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update paths in compileresults call Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * test run to see file structure of output Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * test run to see file structure of output Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check to see if compileresults fails Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update paths for compiled output db in annual_summaries.py Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * update cml action to run only when run-simulation label is added Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * see if the label condition if contains(...) works Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * see if the label condition if contains(...) works Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * run action based on pr labeling Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * rename templates.zip to input_tepmlates.zip * rename templates to template Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * add templates to gitignore Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * check for templates in rest_api_gcbm folder Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Revert "add templates to gitignore" This reverts commit 4ed4a3e. * refactor sim name form run4 test-run Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * changes docker build to docker pull in cml-report.yml line 24 Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * test changes * push to old version * reduce number of threads * try fixing * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * Test CML Action with linux-demo.zip as configuration Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> * test dataset tracking action * remove useless files * remove more useless files * after all a new workflow * label pr workflow Signed-off-by: radis toubalidis <rtoumpalidis@gmail.com> Signed-off-by: radistoubalidis <rtoumpalidis@gmail.com> Co-authored-by: HarshCasper <erbeusgriffincasper@gmail.com>
moja-global · Aug 13, 2022 · c363558 · c363558
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commit c363558
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diff --git a/.github/workflows/cml-report.yml b/.github/workflows/cml-report.yml
@@ -0,0 +1,64 @@
+name: Generate CML Report
+on:
+  pull_request:
+    types: [ labeled ]
+    branches:
+      - master
+
+jobs:
+  generate_cml_report:
+    if:  ${{ github.event.label.name == ['run-simulation'] }}
+    runs-on: ubuntu-latest
+    defaults:
+      run:
+        shell: bash
+    container: 
+      image: ghcr.io/moja-global/rest_api_gcbm:master
+      ports:
+        - "8080:8080"
+    steps:
+
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - uses: actions/setup-node@v3
+        with:
+          node-version: 16
+
+      - name: Run the Simulation
+        run: |
+          apt-get update && apt-get install unzip -y
+          pushd local/rest_api_gcbm/tests/
+          unzip linux-demo.zip
+          cd config/
+          /opt/gcbm/moja.cli --config_file gcbm_config.cfg --config_provider provider_config.json
+          popd
+          cd local/rest_api_gcbm && mkdir GCBM.CompileResults
+          
+      - name: Checkout the Repository
+        uses: actions/checkout@v3
+        with:
+          repository: moja-global/GCBM.CompileResults
+          path: local/rest_api_gcbm/GCBM.CompileResults
+
+      - name: Compile the Results
+        run: |
+          cd local/rest_api_gcbm
+          python3 GCBM.CompileResults/compileresults.py sqlite:///tests/output/gcbm_output.db --output_db sqlite:///tests/output/compiled_simulation_output.db
+          
+      - name: Install dependencies
+        run: pip3 install pandas matplotlib
+
+      - name: Setup CML
+        uses: iterative/setup-cml@v1
+
+      - name: Send the report
+        env:
+         repo_token: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+         cd local/rest_api_gcbm
+         python3 annual_summaries.py
+         echo "# GCBM Model" > report.md
+         echo "## Total Biomass Curve" >> report.md
+         cml-publish tests/output/total_biomass_mt.png --md >> report.md
+         cml-send-comment report.md
diff --git a/local/rest_api_gcbm/Dockerfile b/local/rest_api_gcbm/Dockerfile
@@ -10,6 +10,10 @@ RUN pip install --no-cache-dir -r requirements.txt
 # Adding npm for CML Actions
 RUN apt-get update 
 RUN apt-get install nodejs npm -y
+RUN apt-get install -y python3-dev \
+    && cd /usr/local/bin \
+    && ln -s /usr/bin/python3 python
+RUN python --version
 RUN node --version
 RUN npm --version
 

diff --git a/local/rest_api_gcbm/annual_summaries.py b/local/rest_api_gcbm/annual_summaries.py
@@ -0,0 +1,19 @@
+import sqlite3
+import pandas as pd
+
+conn = sqlite3.connect("tests/output/compiled_simulation_output.db")
+
+query = f"""
+        SELECT years.year, COALESCE(SUM(i.pool_tc), 0) / 1e6 AS total_biomass_mt
+        FROM (SELECT DISTINCT year FROM v_age_indicators ORDER BY year) AS years
+        LEFT JOIN v_pool_indicators i
+            ON years.year = i.year
+        WHERE i.indicator = 'Total Biomass'
+            AND (years.year BETWEEN 2010 AND 2020)
+        GROUP BY years.year
+        ORDER BY years.year
+        """
+
+df = pd.read_sql_query(query, conn)
+ax = df.plot.line("year")
+ax.figure.savefig("tests/output/total_biomass_mt.png", dpi=300)
diff --git a/local/rest_api_gcbm/local_run.postman_collection b/local/rest_api_gcbm/local_run.postman_collection
@@ -49,177 +49,177 @@
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/variables.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/variables.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/spinup.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/spinup.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/provider_config.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/provider_config.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/pools_cbm.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/pools_cbm.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/modules_output.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/modules_output.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/modules_cbm.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/modules_cbm.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/localdomain.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/localdomain.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/internal_variables.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/internal_variables.json"
 								},
 								{
 									"key": "config_files",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/gcbm_config.cfg"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/config/gcbm_config.cfg"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/bounding_box.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/bounding_box.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/Classifier1_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/Classifier1_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/Classifier1_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/Classifier1_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/Classifier2_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/Classifier2_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/Classifier2_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/Classifier2_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2011_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2011_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2011_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2011_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2012_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2012_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2012_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2012_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2013_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2013_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2013_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2013_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2014_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2014_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2014_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2014_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2015_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2015_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2015_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2015_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2016_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2016_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2016_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2016_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2018_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2018_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/disturbances_2018_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/disturbances_2018_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/initial_age_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/initial_age_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/initial_age_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/initial_age_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/mean_annual_temperature_moja.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/mean_annual_temperature_moja.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/mean_annual_temperature_moja.tiff"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/mean_annual_temperature_moja.tiff"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/tiled/study_area.json"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/layers/tiled/study_area.json"
 								},
 								{
 									"key": "input",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/input_database/gcbm_input.db"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/input_database/gcbm_input.db"
 								},
 								{
 									"key": "db",
 									"type": "file",
-									"src": "/C:/Users/nynal/Downloads/FLINT.Cloud-master/FLINT.Cloud-master/GCBM/config/input_database/gcbm_input.db"
+									"src": "/C:/Users/Vision/FLINT/FLINT.Cloud/GCBM/input_database/gcbm_input.db"
 								},
 								{
 									"key": "",

diff --git a/local/rest_api_gcbm/requirements.txt b/local/rest_api_gcbm/requirements.txt
@@ -10,6 +10,6 @@ flask-cors==3.0.10
 simplejson==3.17.6
 sqlalchemy==1.4.32
 psutil==5.9.0
-pandas==1.4.2
-matplotlib==3.5.2
-rasterio
+pandas
+matplotlib
+rasterio