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Refine tskit metadata #742

Merged
merged 2 commits into from Jun 2, 2021
Merged

Refine tskit metadata #742

merged 2 commits into from Jun 2, 2021

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molpopgen
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@molpopgen molpopgen linked an issue Jun 2, 2021 that may be closed by this pull request
…to the intended

bool.

Add link to vignette from DiploidPopulation.dump_tables_to_tskit docs.

Add passing ModelParams to DiploidPopulation.dump_tables_to_tskit in
tests.

Remove unused docstring from _dump_tables_to_tskit.

Breaking change: all non-self arguments to
DiploidPopulation.dump_tables_to_tskit are now kw-only.

Add top-level tree-sequence/table collection metadata. Closes #725

Allow user-specified population table metadata. Closes #740
@molpopgen molpopgen merged commit 910465f into dev Jun 2, 2021
@molpopgen molpopgen deleted the refine_tskit_metadata branch June 2, 2021 21:03
molpopgen added a commit that referenced this pull request Jun 7, 2021
* DiploidMetadata.[alive|preserved|first_generation] are now converted to the intended
bool.

Add link to vignette from DiploidPopulation.dump_tables_to_tskit docs.

Add passing ModelParams to DiploidPopulation.dump_tables_to_tskit in
tests.

Remove unused docstring from _dump_tables_to_tskit.

Breaking change: all non-self arguments to
DiploidPopulation.dump_tables_to_tskit are now kw-only.

Add top-level tree-sequence/table collection metadata. Closes #725

Allow user-specified population table metadata. Closes #740

* Update docstring for DiploidPopulation.dump_tables_to_tskit
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Need tree-sequence-level metadata
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