First push ODK

.gitignore

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+.DS_Store
+*.tmp
+src/ontology/mirror
+src/ontology/mirror/*
+src/ontology/geno.owl
+src/ontology/geno.obo
+src/ontology/geno.json
+src/ontology/geno-base.*
+src/ontology/geno-basic.*
+src/ontology/geno-full.*
+src/ontology/geno-simple.*
+src/ontology/geno-simple-non-classified.*
+semantic.cache
+bin/
+src/ontology/seed.txt
+src/ontology/target/
+src/ontology/dosdp-tools.log
+src/patterns/imports/seed_sorted.txt
+src/ontology/ed_definitions_merged.owl
+src/ontology/patterns 
+*.tmp.obo
+*.tmp.owl

.travis.yml

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+## REMEMBER TO SET UP YOUR GIT REPO FOR TRAVIS
+## Go to: https://travis-ci.org/monarch-initiative for details
+sudo: required
+
+services:
+  - docker
+
+before_install:
+  - docker pull obolibrary/odkfull
+
+# command to run tests
+script: cd src/ontology && sh run.sh make test
+
+#after_success:
+#  coveralls
+
+# whitelist
+branches:
+  only:
+    - master
+    - test-travis
+
+### Add your own lists here
+### See https://github.com/INCATools/ontology-development-kit/issues/35
+notifications:
+  email:
+    - obo-ci-reports-all@groups.io

src/metadata/README.md

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+Metadata files for the OBO Library
+
+ * [geno.yml](geno.yml)
+     * Determines how your purl.obolibrary.org/obo/geno/ redirects will be handled
+     * Go here: https://github.com/OBOFoundry/purl.obolibrary.org/tree/master/config
+     * Click [New File](https://github.com/OBOFoundry/purl.obolibrary.org/new/master/config)
+     * Paste in the contents of [geno.yml](geno.yml)
+     * Click "Commit new file"
+     * IMPORTANT: remember to make a pull request
+     * An OBO admin will merge your Pull Request *providing it meets the requirements of the OBO library*
+ * [geno.md](geno.md)
+     * Determines how your metadata is shown on OBO Library, OLS and AberOWL
+     * Go here: https://github.com/OBOFoundry/OBOFoundry.github.io/tree/master/ontology
+     * Click [New File](https://github.com/OBOFoundry/OBOFoundry.github.io/new/master/ontology)
+     * Paste in the contents of [geno.md](geno.md)
+     * Click "Commit new file"
+     * IMPORTANT: remember to make a pull request
+     * An OBO admin will merge your Pull Request *providing it meets the requirements of the OBO library*
+
+For more background see:
+
+ * http://obofoundry.org/
+ * http://obofoundry.org/faq/how-do-i-edit-metadata.html

src/metadata/geno.md

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+---
+layout: ontology_detail
+id: geno
+title: GENO ontology
+jobs:
+  - id: https://travis-ci.org/monarch-initiative/GENO-ontology
+    type: travis-ci
+build:
+  checkout: git clone https://github.com/monarch-initiative/GENO-ontology.git
+  system: git
+  path: "."
+contact:
+  email: 
+  label: 
+  github: 
+description: GENO ontology is an ontology...
+domain: stuff
+homepage: https://github.com/monarch-initiative/GENO-ontology
+products:
+  - id: geno.owl
+    name: "GENO ontology main release in OWL format"
+  - id: geno.obo
+    name: "GENO ontology additional release in OBO format"
+  - id: geno.json
+    name: "GENO ontology additional release in OBOJSon format"
+  - id: geno/geno-base.owl
+    name: "GENO ontology main release in OWL format"
+  - id: geno/geno-base.obo
+    name: "GENO ontology additional release in OBO format"
+  - id: geno/geno-base.json
+    name: "GENO ontology additional release in OBOJSon format"
+dependencies:
+- id: ro
+- id: iao
+- id: so
+
+tracker: https://github.com/monarch-initiative/GENO-ontology/issues
+license:
+  url: http://creativecommons.org/licenses/by/3.0/
+  label: CC-BY
+activity_status: active
+---
+
+Enter a detailed description of your ontology here. You can use arbitrary markdown and HTML.
+You can also embed images too.
+

src/metadata/geno.yml

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+# PURL configuration for http://purl.obolibrary.org/obo/geno
+
+idspace: GENO
+base_url: /obo/geno
+
+products:
+- geno.owl: https://raw.githubusercontent.com/monarch-initiative/GENO-ontology/master/geno.owl
+- geno.obo: https://raw.githubusercontent.com/monarch-initiative/GENO-ontology/master/geno.obo
+
+term_browser: ontobee
+example_terms:
+- geno_0000000
+
+entries:
+
+- prefix: /releases/
+  replacement: https://raw.githubusercontent.com/monarch-initiative/GENO-ontology/v
+
+- prefix: /tracker/
+  replacement: https://github.com/monarch-initiative/GENO-ontology/issues
+
+- prefix: /about/
+  replacement: http://www.ontobee.org/ontology/GENO?iri=http://purl.obolibrary.org/obo/
+
+## generic fall-through, serve direct from github by default
+- prefix: /
+  replacement: https://raw.githubusercontent.com/monarch-initiative/GENO-ontology/master/

src/ontology/Dockerfile

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+FROM cmungall/osk
+
+CMD make test