enable pheno explorer test

monarch-initiative · Aug 22, 2023 · b45227c · b45227c
1 parent ec7c514
commit b45227c
Show file tree

Hide file tree

Showing 2 changed files with 4 additions and 6 deletions.
diff --git a/frontend/e2e/phenotype-explorer.test.ts b/frontend/e2e/phenotype-explorer.test.ts
@@ -21,7 +21,6 @@ test("Populating example works", async ({ page }) => {
 });
 
 test("Mode switching works", async ({ page }) => {
-  test.skip(true, "Commented out set-to-taxon mode until implemented in API");
 
   await page.goto("/explore#phenotype-explorer");
 
@@ -54,7 +53,7 @@ test("Mode switching works", async ({ page }) => {
  */
 
 test("Phenotype set vs gene/disease works", async ({ page }) => {
-  test.skip(true, "Feature not implemented yet");
+  test.skip(true, "API endpoint not implemented yet");
 
   await page.goto("/explore#phenotype-explorer");
 

diff --git a/frontend/src/api/phenotype-explorer.ts b/frontend/src/api/phenotype-explorer.ts
@@ -1,6 +1,5 @@
 import type {
   AssociationResults,
-  // SearchResults,
   TermSetPairwiseSimilarity,
 } from "@/api/model";
 import type { Options, OptionsFunc } from "@/components/AppSelectTags.vue";
@@ -97,7 +96,7 @@ type _Comparison = {
 /** compare a set of phenotypes to another set of phenotypes */
 export const compareSetToSet = async (
   aPhenotypes: string[],
-  bPhenotypes: string[],
+  bPhenotypes: string[]
 ) => {
   /** make request options */
   const headers = new Headers();
@@ -124,7 +123,7 @@ export const compareSetToSet = async (
       target: match.match_target,
       target_label: match.match_target_label,
       score: match.score,
-    }),
+    })
   );
 
   matches.sort((a, b) => b.score - a.score);
@@ -135,7 +134,7 @@ export const compareSetToSet = async (
 /** compare a set of phenotypes to a gene or disease taxon id */
 export const compareSetToTaxon = async (
   phenotypes: string[],
-  taxon: string,
+  taxon: string
 ): Promise<Comparison> => {
   /** endpoint settings */
   const params = {