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Create list of ICD terms excluded from our mapping #4570

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matentzn opened this issue Mar 3, 2022 · 4 comments
Open
2 of 3 tasks

Create list of ICD terms excluded from our mapping #4570

matentzn opened this issue Mar 3, 2022 · 4 comments

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@matentzn
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matentzn commented Mar 3, 2022

Action items:

  • A draft list (does not have to be complete, just a good start) of terms or branches (terms with children) that we can safely ignore in our mapping effort
  • Add a new column to the above called "regex". Start collecting regular expressions on labels that you believe will reliably select a term of some category. For example, rather than recording a code like ICD10CM:ABC123 with children, you can record an expression like " injury, other" in a separate column, for example (simplified table for illustration):
code exclusion reason children? regex
ICD10CM:ABC123 procedure no "[ ]injury, other"

Add this in column this tab

EDIT:
instead of putting regex into exclusion table, we added a match column to the exclusion rules table here (column B)

@sabrinatoro
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note: a new issue was created (#4577). I don't know how that was done (it was a wrong click on a random part) and I don't know how to remove it.
Sorry for any confusion!

@sabrinatoro
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List of ICD terms excluded from mapping is available in the 'Excluded codes' tab here

@matentzn
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matentzn commented Mar 4, 2022

This is enough to satisfy this issue for now - we can close it and iterate. Awesome, good job. I can see that all child terms are excluded for all of the code ranges, which is extremely useful!

@joeflack4
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joeflack4 commented Mar 12, 2022

I've updated to expand those term ranges and get information for actual terms, and, in 1 case, their children.

Work has been completed in this PR: #4570

There are some assumptions I made regarding the output structure. If you guys want the output changed, let me know in the PR and I'll update.

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