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Issue with talon filter #142
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Just for clarity's sake, did downgrading numpy like this solve your issue? If so I can work it into a new requirements update. |
Hi, no I'm still trying to work this out. |
Can you please check which version of pandas you're running? It looks like the |
Hi, I'm sorry it took me so long to get back to you. I had some conflicts with conda environment I was initially trying to run it with. However, it now runs fine and having |
Hi,
I have been trying to run talon filter on my database:
talon_filter_transcripts --db talon/database.db -a Hg38 --maxFracA 0.5 --minCount 1 --minDatasets 3 --o talon/talon_run.csv
And I'm getting an import error:
I previously had issues with
numpy
, so I installed it to be version1.22.4
.The text was updated successfully, but these errors were encountered: