Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Detection of ampC in eucast_rules() #19

Closed
msberends opened this issue Dec 23, 2020 · 1 comment
Closed

Detection of ampC in eucast_rules() #19

msberends opened this issue Dec 23, 2020 · 1 comment

Comments

@msberends
Copy link
Owner

eucast_rules() does apply the EUCAST tables and also makes cefoxitine R for chromosomal ampC producers. However, reported values for 3rd generation cephalosporins are left intact. According to EUCAST, those values should be blinded or should at least have a comment.

Possible new implementations:

  • Alter value of those bug/drug combinations (to "R" or NA)
  • Make new argument to set this option
@msberends
Copy link
Owner Author

Fixed in ed19891

@msberends msberends mentioned this issue Mar 11, 2021
Closed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@msberends