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Environment variables are the preferred way of storing authentication information. They are inherited by child R processes when set in a parent and are not displayed to the screen when you look at options.
The change that needs to happen here is that catmaid_login should
see if it has been given explicit parameters and if so use those
check for a cached login
check for environment variables
check R options
Right now 1,2 happen in catmaid_login while 4 happens inside catmaid_connection. I guess 3 could also happen inside catmaid_connection.
The package docs/READMEs need to be updated to recommend environment variables. This should have the knock on effect of allowing pkgdown to run vignettes requiring authentication.
The text was updated successfully, but these errors were encountered:
Environment variables are the preferred way of storing authentication information. They are inherited by child R processes when set in a parent and are not displayed to the screen when you look at options.
The change that needs to happen here is that
catmaid_login
shouldRight now 1,2 happen in
catmaid_login
while 4 happens insidecatmaid_connection
. I guess 3 could also happen insidecatmaid_connection
.The package docs/READMEs need to be updated to recommend environment variables. This should have the knock on effect of allowing pkgdown to run vignettes requiring authentication.
The text was updated successfully, but these errors were encountered: