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@pditommaso pditommaso released this 02 May 17:56
· 2000 commits to master since this release
v21.04.0
7c22888
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pditommaso Paolo Di Tommaso
GPG key ID: E6935EB42EE2957A
Learn about vigilant mode.
  • Fix NPE when AWS Batch job container is not returned [412b6fd]
  • Fix execution hang when native task fail to submit #2060 [1253485]
  • Update preview message [e1eebdc]
  • Fix nf-ignite all packaging [72b6a42]
  • Fix GS failing tests [be4f91e]
  • Fix AWS batch executor fails when using self-contained distribution #2058 [2e344c1]
  • Fix groupTuple sort criteria with closure #2020 [28a579a]
  • Patch invalid double number cli parsing #2039 [4de4670] [dcadaae]
  • Update sphinx_rtd_theme 0.5.2 [4a165f4]
  • Disable cpus option when running docker with legacy opt [1a7854a]

21.04.0-edge - 8 Apr 2021

  • Add readOnly flag to k8s volume mounts (#2013) [33bd24a]
  • Add Start default plugins on-demand #1964 [cf2a9d7]
  • Add support for tower workspaceId [e297768]
  • Improve suppor for BitBucket server repos [eb946e2]
  • Fix toInt/Long/Float/Double operator hangs with value channel [7c35d98]
  • Fix regression caused by nested params handling #1923 [b25af49]
  • Fix Cache invalidation when repo is cloned between runs #1989 [ac526f3]
  • Fix Invalid setting of TMP var with singularity #1997 [23f8012] [472cfbd]
  • Fix issue overriding nested params from cli #1923 [cfe6b1d]
  • Fix az path handling curly brackets globs #1969 [c78a1bb]
  • Fix Missing git credentials when checking last commit id [f101308]
  • Fix plugins version check against local installation [535c2bb]
  • Fix local dependant formatting #1962 [2a5cbac]
  • Fix Encode path parameter at GitLab getContentUrl [6f80f65]
  • Fix Only use sudo rm with docker #1956 [f949042]
  • Prevent AZ NPE when missing vmtype + better logging #1992 [711362c]
  • Refactor params file var binding #1860 #1972 [330f044]
  • Prevent jobs names longer than 100 chars OAR exec [6daa21b]
  • Bump nf-azure@0.9.6 + nf-amazon@1.0.3 [aff1d35]
  • Bump nf-amazon@1.0.3 - s3fs@1.0.9 - solve #1830 [b3b221c]
  • Bump nf-tower@1.1.0 [29fdd9f]
  • Bump nf-amazon@1.0.4 + nxf-s3fs@1.1.0 [c638af80]
  • Bump nf-azure@0.9.7 [07c59946]

21.03.0-edge - 5 Mar 2021

  • Add support for serializable ValueObject [8dfaadf]
  • Add abilitity to fetch revisioned git assets
  • Add support for FixOwnership to AWS batch [24f8374]
  • Add support for custom network to GLS #1810 [171f4aa]
  • Add ability to handle list of az vm types [00ced0b]
  • Add tower config scope to docs #1890 f2bd96f
  • Add charliecloud container environment from file (#1909) 4553648
  • Add azcopy tool install mode opts [9e9337d]
  • Update Az default vm type to Standard_D4_v3 [4c6e76b]
  • Update NF console dependency [a2d06e1]
  • Remove CDN from timeline reports and make them offline readable #1927 [c0e5a94]
  • Fix plugins install failing in some file systems #1882 [8cc4339]
  • Fix catch failing commands in nxf_parallel #1884 [dd56f6c]
  • Fix missing error on empty process script [3607f84]
  • Fix GSL path de-serialization issue [c6cf784]
  • Fix Memory unit cannot be a negative number #1902 [abd1c9d]
  • Fix pod spec labels to start with numbers in addition to alphas [79740ed]
  • Fix OAR executor log files #1761 [6f2ff4e]
  • Fix issue cause by sleep with subsecond argument [c4be8d0] [63974ac]
  • Fix az blob storage SAS permissions [18a3321]
  • Fix sort human-readable tasks in report [6d68f28]

21.02.0-edge - 1 Feb 2021

  • Fix Issue when merging nested cli params #1856 [275e54c] [fe37da6]
  • Fix job status detection on PBS pro #1840 [c159890]
  • Fix Issue when merging nested cli params #1856 (19 hours ago)
  • Revert the CPU/memory options being passed to singularity VM instead of singularity container [0d04e0f]
  • Add ability to specify plugins with cli [de91218]
  • Decrease upload/download process polling to 0.2secs [6ca2d6c]
  • Remove nf-amazon as default [e6810e9]
  • Make plugin services singleton [cacd932] [5787be6]
  • Make repository provider accessible to subclasses [988bccc]
  • Fix error on plugin downloading #1859 [77cabb3]

21.01.1-edge - 15 Jan 2021

  • Plugins stability improvements [8d849ec] [bf09382]
  • Charliecloud improvements [2242411]
  • Fix issue of FS discovery with dyn plugin loading [bf5e86d]
  • Fix crash on startup when mem reported < 0 [095236b]
  • Fix and stability [e4b8afb]
  • Fix launcher on Java11 [c6b7803]
  • Add plugins custom version manager (4 days ago)
  • Improve NF version checking [d33ea64]
  • Bump plugins minor upgrade [f91bc21]

21.01.0-edge - 04 Jan 2021

  • Merge plugins feature [d959bfd]
  • Prevent twice access remote scm file [b279855]
  • Fix DAG edges not connected correctly #1486 [cece116]
  • Fix k8s executor must provide cpu resource requests #1570 [6896e92]
  • Fix http/ftp read buffer size [a2886ba]
  • Add support for OAuth Bearer auth [5823c28]
  • Add support for basic auth for http/s file provider [6027fcb]
  • Add User-Agent info to httpfs requests [222637d]
  • Update CPU and RAM for containers (#1833) [ccf5c8b]
  • Move test containes to quay.io [7db053e] [773be70] [c10a7f5]

20.12.0-edge - 12 Dec 2020

  • Add support for charliecloud container engine #1809
  • Fix glitch on K8s task progress update [668434f]
  • Upgrade to groovy 3.0.7 [2705603]

20.11.0-edge - 16 Nov 2020

Assets 4