Bump snakemake pin to 7.32.3 #176
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Since our our last snakemake pin bump ~6 months ago snakemake has added support for a default profile that allows reducing required command line flags to a mininmum. Without default profile, one always either needs to explicitly specify a profile or set things like `--cores all` which is very annoying. Now, you can simply put those flags in `profiles/default/config.yaml` and they'll automatically be used when you invoke `snakemake` 7.32.3 appears to be reasonably stable, no major bugs reported in a month I've used it in production for a month now, without issues.
victorlin
approved these changes
Sep 11, 2023
|
Actually, we're already at 7.32.3 in conda-base, and there have been no complaints, so merging |
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Since our our last snakemake pin bump ~6 months ago
snakemake has added support for a default profile
that allows reducing required command line flags to
a mininmum. Without default profile, one always either
needs to explicitly specify a profile or set things like
--cores allwhich is very annoying.Now, you can simply put those flags in
profiles/default/config.yamland they'll automatically be used when you invoke
snakemake7.32.3 appears to be reasonably stable, no major bugs reported in a month
I've used it in production for a month now, without issues.
Checklist: